HHsearch results for GI: 254780701 and protein with PDBid: 1pvg_A

>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A*
Probab=96.50  E-value=0.0033  Score=44.60  Aligned_cols=83  Identities=18%  Similarity=0.246  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHCCCCC---CEEEEEEEEECCCEEEEEEEECCCCCCHHH--------HHHHCCCCCCCCC----CC
Q ss_conf             99988777655688606798---879999999769859999987899789878--------5442265231577----76
Q gi|254780701|r  367 GMRQVILNLLSNAVKFTAIG---GRVHVTVGWTSGRGQYISIKDNGPGIAEGE--------IPTVLTSFGQGSI----AI  431 (495)
Q Consensus       367 ~L~qvl~NLi~NAiK~T~~g---G~V~v~~~~~~~~~~~i~V~DtG~GI~~e~--------~~~iF~~F~r~~~----~~  431 (495)
                      -|.+++.-+|.||+.-.-+|   ..|.|.+. .+++  .|+|.|+|.|||-+.        .+-||....-+++    ++
T Consensus        64 Gl~~l~~EildNavDe~~~g~~~~~I~V~i~-~~dg--sisV~DnGrGIPv~~h~~~~~~~~E~i~t~LhaGgkfd~~~y  140 (418)
T 1pvg_A           64 GLFKIFDEILVNAADNKVRDPSMKRIDVNIH-AEEH--TIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYDDDEK  140 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCCEEEEEEE-TTTT--EEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCCTTSC
T ss_pred             EEEEEEEEEEECHHHHHHCCCCCCEEEEEEE-CCCC--EEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf             0024656899980247651688877999996-7998--899996990146104366786411578877403554457753


Q ss_pred             CCCCCCCCCHHHHHHHHHHHC
Q ss_conf             789998880589999999961
Q gi|254780701|r  432 KSAEQGVGLGLPIAQSIMANH  452 (495)
Q Consensus       432 ~~~~~GtGLGLaIvk~lve~h  452 (495)
                      +...+.+|+|.++|-.+-+..
T Consensus       141 k~SGGlhGvGasvvNalS~~f  161 (418)
T 1pvg_A          141 KVTGGRNGYGAKLCNIFSTEF  161 (418)
T ss_dssp             CCCSCCSSCHHHHHHHTEEEE
T ss_pred             EECCCCCCCCHHHHHHHHHHH
T ss_conf             040787552640227663565