HHsearch results for GI: 254780701 and protein with PDBid: 1th8_A

>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=99.46  E-value=8.9e-13  Score=126.58  Aligned_cols=96  Identities=19%  Similarity=0.327  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHHCC---CCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             999988777655688606---79887999999976985999998789978987854422652315777678999888058
Q gi|254780701|r  366 KGMRQVILNLLSNAVKFT---AIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGL  442 (495)
Q Consensus       366 ~~L~qvl~NLi~NAiK~T---~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGL  442 (495)
                      .-+++++.|+++|||||.   .++|.|.|++.. .++.+.|+|+|+|+|||+  .+.+|+||+...    ...+|+||||
T Consensus        38 ~di~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~-~~~~l~i~V~D~G~Gi~~--~~~~~~~~~~~~----~~~~~~GlGL  110 (145)
T 1th8_A           38 TEIKTVVSEAVTNAIIHGYNNDPNGIVSISVII-EDGVVHLTVRDEGVGIPD--IEEARQPLFTTK----PELERSGMGF  110 (145)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE-ETTEEEEEEEECSSCCSC--HHHHTCCC-----------CCCSCHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE-ECCEEEEEEEECCCCCCC--HHHCCCCCCCCC----CCCCCCCHHH
T ss_conf             999999999999998843489999089999999-378999999964789585--775378775446----7999573689


Q ss_pred             HHHHHHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf             999999996198599997989952988984
Q gi|254780701|r  443 PIAQSIMANHGGQFLIRSKLREGVEVIAIL  472 (495)
Q Consensus       443 aIvk~lve~hgG~i~v~S~~G~Gt~f~v~L  472 (495)
                      +|+|+++    ++++++|++|+||+|+++-
T Consensus       111 ~ii~~l~----d~i~i~s~~~~Gt~v~l~K  136 (145)
T 1th8_A          111 TIMENFM----DEVIVESEVNKGTTVYLKK  136 (145)
T ss_dssp             HHHHHHS----SEEEEEEETTTEEEEEEEE
T ss_pred             HHHHHHC----CEEEEEECCCCCEEEEEEE
T ss_conf             9999969----9999998399969999998