HHsearch results for GI: 254780701 and protein with PDBid: 1th8_A
>1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A*
Probab=99.46 E-value=8.9e-13 Score=126.58 Aligned_cols=96 Identities=19% Similarity=0.327 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHHCC---CCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 999988777655688606---79887999999976985999998789978987854422652315777678999888058
Q gi|254780701|r 366 KGMRQVILNLLSNAVKFT---AIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGL 442 (495)
Q Consensus 366 ~~L~qvl~NLi~NAiK~T---~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGL 442 (495)
.-+++++.|+++|||||. .++|.|.|++.. .++.+.|+|+|+|+|||+ .+.+|+||+... ...+|+||||
T Consensus 38 ~di~lav~E~~~NaI~Ha~~~~~~~~I~i~~~~-~~~~l~i~V~D~G~Gi~~--~~~~~~~~~~~~----~~~~~~GlGL 110 (145)
T 1th8_A 38 TEIKTVVSEAVTNAIIHGYNNDPNGIVSISVII-EDGVVHLTVRDEGVGIPD--IEEARQPLFTTK----PELERSGMGF 110 (145)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE-ETTEEEEEEEECSSCCSC--HHHHTCCC-----------CCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE-ECCEEEEEEEECCCCCCC--HHHCCCCCCCCC----CCCCCCCHHH
T ss_conf 999999999999998843489999089999999-378999999964789585--775378775446----7999573689
Q ss_pred HHHHHHHHHCCCEEEEEEECCCCEEEEEEE
Q ss_conf 999999996198599997989952988984
Q gi|254780701|r 443 PIAQSIMANHGGQFLIRSKLREGVEVIAIL 472 (495)
Q Consensus 443 aIvk~lve~hgG~i~v~S~~G~Gt~f~v~L 472 (495)
+|+|+++ ++++++|++|+||+|+++-
T Consensus 111 ~ii~~l~----d~i~i~s~~~~Gt~v~l~K 136 (145)
T 1th8_A 111 TIMENFM----DEVIVESEVNKGTTVYLKK 136 (145)
T ss_dssp HHHHHHS----SEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHC----CEEEEEECCCCCEEEEEEE
T ss_conf 9999969----9999998399969999998