HHsearch results for GI: 254780701 and protein with PDBid: 1zxm_A
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=96.79 E-value=0.0028 Score=45.17 Aligned_cols=84 Identities=20% Similarity=0.234 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCC---CEEEEEEEEECCCEEEEEEEECCCCCCHH--------HHHHHCCCCCCCCC----C
Q ss_conf 999988777655688606798---87999999976985999998789978987--------85442265231577----7
Q gi|254780701|r 366 KGMRQVILNLLSNAVKFTAIG---GRVHVTVGWTSGRGQYISIKDNGPGIAEG--------EIPTVLTSFGQGSI----A 430 (495)
Q Consensus 366 ~~L~qvl~NLi~NAiK~T~~g---G~V~v~~~~~~~~~~~i~V~DtG~GI~~e--------~~~~iF~~F~r~~~----~ 430 (495)
.-|.+++.-+|.||+.---.| ..|.|.+. .++. .|+|.|+|.|||-+ -.+.||....-+++ +
T Consensus 51 ~GL~~l~~EildNavDe~~~g~~~~~I~V~i~--~d~~-sitV~DnGrGIPv~~h~~~~~~~~e~i~t~Lhaggkfd~~~ 127 (400)
T 1zxm_A 51 PGLYKIFDEILVNAADNKQRDPKMSCIRVTID--PENN-LISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDE 127 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEE--TTTT-EEEEEEESSCCCCSEETTTTEEHHHHHHHSSSEESCCCGGG
T ss_pred CEEEEEEEEEEECHHHHHHHCCCCCEEEEEEE--CCCC-EEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf 70058998999965548865579847999997--7999-89999899653200215667321024677841315668986
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 6789998880589999999961
Q gi|254780701|r 431 IKSAEQGVGLGLPIAQSIMANH 452 (495)
Q Consensus 431 ~~~~~~GtGLGLaIvk~lve~h 452 (495)
++...+-+|+|.+.|-.+-+..
T Consensus 128 yk~sgGlhGVG~svvNalS~~~ 149 (400)
T 1zxm_A 128 KKVTGGRNGYGAKLCNIFSTKF 149 (400)
T ss_dssp CCCCSCCSSCHHHHHHHTEEEE
T ss_pred CEEECCCCCCCHHHHHHCCHHH
T ss_conf 2363464452525551103411