HHsearch results for GI: 254780701 and protein with PDBid: 2q2e_B
>2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei}
Probab=98.29 E-value=2e-05 Score=63.57 Aligned_cols=113 Identities=23% Similarity=0.249 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCC---EEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCC-CCCCC-
Q ss_conf 7989999887776556886067988---799999997698599999878997898785442265231577767-89998-
Q gi|254780701|r 363 ADEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIK-SAEQG- 437 (495)
Q Consensus 363 ~D~~~L~qvl~NLi~NAiK~T~~gG---~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~~~~-~~~~G- 437 (495)
.+..-|.+++.-||+||+.-...-| .|.|.+...+++...|+|+|+|+|||.++++.+|.....++.-.. ...+|
T Consensus 33 ~~~~~L~~~v~Elv~Na~Da~~~~g~~~~I~v~i~~~~~~~~~i~V~DnG~Gm~~d~~~~~l~~l~~sgK~~~~~~s~G~ 112 (621)
T 2q2e_B 33 SAPRSLITTVKEAVDNALDACEEAGILPDILVQVERTGPDYVTVIIEDNGPGIVREQIPKVFAKLLYGSRFHALKQSRGQ 112 (621)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTSCSCEEEECCEEETTTEEEEEEECCSCCCCGGGHHHHHSCCCCC--CCCCC-CCSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCCC
T ss_conf 86217899899999718868976399982599999689964699999848999989999986084667787665117997
Q ss_pred CCCHHHHHHHHHHHCC-CEEEEEEEC-CCCEEEEEEECHH
Q ss_conf 8805899999999619-859999798-9952988984724
Q gi|254780701|r 438 VGLGLPIAQSIMANHG-GQFLIRSKL-REGVEVIAILPNT 475 (495)
Q Consensus 438 tGLGLaIvk~lve~hg-G~i~v~S~~-G~Gt~f~v~LP~~ 475 (495)
.|+|.+-|-.+...|- ..++|.|.. +.+..+...+...
T Consensus 113 ~GvG~~gv~~~S~~~va~~v~V~s~~~~~~~~~~~~~~~~ 152 (621)
T 2q2e_B 113 QGIGISAAVLYAQMTAGRHTKILSKTSPTAPAHYYELMIN 152 (621)
T ss_dssp SSHHHHHHHHHHHHHTCCCCEEEEECSSSSCEEEEECCCC
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCC
T ss_conf 6656768888768642863899996179872599984156