HHsearch results for GI: 254780701 and protein with PDBid: 3ehh_A
>3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A*
Probab=99.80 E-value=3.7e-17 Score=164.16 Aligned_cols=188 Identities=16% Similarity=0.188 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 88999997764201389999999998503368789378999999999999999999999999987422001565310119
Q gi|254780701|r 249 KSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISL 328 (495)
Q Consensus 249 Ks~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L 328 (495)
++++...+-|.+.++|++|..+.+.+.... ....+...+.+..+....+.+...+..+ ... ..+...
T Consensus 28 R~ria~~lHd~v~~~Lt~i~~~~~~~~~~~--~~~~~~~~~~l~~i~~~~r~~~~~~~~~---~~~--------~~~~~~ 94 (218)
T 3ehh_A 28 RQRMARDLVDTLGQKLSLMGLKSDLARKLI--YKDPEQAARELKSVQQTARTSLNEVRKI---VSS--------MKGIRL 94 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCHHHHHHHHHHHHHHHHHHHHHHHHH---HTT--------TCCCCH
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHH--------HCCCCH
T ss_conf 999999845335459999999999999753--0587999999999999999999999987---753--------023205
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEE
Q ss_conf 999999999999999731122100036761010-4798999988777655688606798879999999769859999987
Q gi|254780701|r 329 IDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSV-WADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKD 407 (495)
Q Consensus 329 ~~li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v-~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~D 407 (495)
........... ........+........+ ..+...+.+|+.|++.||+||.+. ..|.+.+.. .++.+.+.|.|
T Consensus 95 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~il~ell~Na~kh~~~-~~v~i~~~~-~~~~~~i~v~D 168 (218)
T 3ehh_A 95 KDELINIKQIL----EAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQA-KTCRVDIQQ-LWKEVVITVSD 168 (218)
T ss_dssp HHHHHHHHHHH----HHTTCEEECCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHTCC-SEEEEEEEE-ETTEEEEEEEE
T ss_pred HHHHHHHHHHH----HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEECC-CCCEEEEECCC
T ss_conf 77899999999----8638848998357764457047999999999999711211455-058987414-32034322147
Q ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECHH
Q ss_conf 89978987854422652315777678999888058999999996198599997989952988984724
Q gi|254780701|r 408 NGPGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNT 475 (495)
Q Consensus 408 tG~GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~~ 475 (495)
+|+|||++. .+|+||||++++++++.|||+++++|. .||+|+++||..
T Consensus 169 ng~g~~~~~------------------~~~~GlGL~~v~~~i~~~gG~i~~~s~--~Gt~~~i~lP~~ 216 (218)
T 3ehh_A 169 DGTFKGEEN------------------SFSKGHGLLGMRERLEFANGSLHIDTE--NGTKLTMAIPNN 216 (218)
T ss_dssp SSCCCC--------------------------CHHHHHHHHHHHTTCEEEEECS--SSEEEEEEEEC-
T ss_pred CCCCCCCCC------------------CCCCCCHHHHHHHHHHHCCCEEEEECC--CCEEEEEEECCC
T ss_conf 987667778------------------999982199999999988988999869--987999997199