HHsearch results for GI: 254780701 and protein with PDBid: 3fv5_A
>3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A*
Probab=94.56 E-value=0.015 Score=38.94 Aligned_cols=104 Identities=14% Similarity=0.256 Sum_probs=58.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCC--CCCEEEEEEEEECCCEEEEEEEECCCCCCHHHH--------HHHCCCCCCCCC-
Q ss_conf 047989999887776556886067--988799999997698599999878997898785--------442265231577-
Q gi|254780701|r 361 VWADEKGMRQVILNLLSNAVKFTA--IGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEI--------PTVLTSFGQGSI- 429 (495)
Q Consensus 361 v~~D~~~L~qvl~NLi~NAiK~T~--~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~--------~~iF~~F~r~~~- 429 (495)
.|.+..-|.+++.-+|+||+.--- .+..|.|.+ ..++. |+|.|+|.|||-+.. +.||....-+++
T Consensus 11 MYiGs~gl~hl~~EildNaiDe~~~g~~~~i~v~~--~~d~s--itV~d~GrGIPv~~h~~~~~~~~e~i~t~l~ag~~f 86 (201)
T 3fv5_A 11 MYTDTTRPNHLGQEVIDNSVDEALAGHAKRVDVIL--HADQS--LEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKF 86 (201)
T ss_dssp GTSCTTSTHHHHHHHHHHHHHHHHTTCCSEEEEEE--CTTSC--EEEEECSSCCCCSBCTTCSSBHHHHHHHCC------
T ss_pred CEECCCCCCEEEEEEEECCHHHHHCCCCCEEEEEE--ECCCC--EEEEECCCCEEEEECCCCCCCEEEEEEEEEECCCCC
T ss_conf 26899887707868888135487548983799999--18980--999997896468586778971459999997035767
Q ss_pred ---CCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEC
Q ss_conf ---76789998880589999999961985999979899529889847
Q gi|254780701|r 430 ---AIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILP 473 (495)
Q Consensus 430 ---~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP 473 (495)
..+...+..|+|.+.+--+-+.. .++.. -.|-.+..++-
T Consensus 87 d~~~~k~sgG~~GvG~~~vNalS~~~----~v~v~-r~g~~~~q~f~ 128 (201)
T 3fv5_A 87 SNKNYQFSGGLHGVGISVVNALSKRV----EVNVR-RDGQVYNIAFE 128 (201)
T ss_dssp ---------------CHHHHHTEEEE----EEEEE-ETTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCE----EEEEE-CCCEEEEEEEE
T ss_conf 88764113775760523447651616----99994-18989999983