HHsearch results for GI: 254780701 and protein with PDBid: 3g7e_A
>3g7e_A DNA gyrase subunit B; isomerase; HET: DNA B46; 2.20A {Escherichia coli} PDB: 1kzn_A* 1aj6_A*
Probab=96.13 E-value=0.0068 Score=41.87 Aligned_cols=108 Identities=19% Similarity=0.340 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CEEEEEEEEECCCEEEEEEEECCCCCCHHH--------HHHHCCCCCCCCCC----
Q ss_conf 8999988777655688606798--879999999769859999987899789878--------54422652315777----
Q gi|254780701|r 365 EKGMRQVILNLLSNAVKFTAIG--GRVHVTVGWTSGRGQYISIKDNGPGIAEGE--------IPTVLTSFGQGSIA---- 430 (495)
Q Consensus 365 ~~~L~qvl~NLi~NAiK~T~~g--G~V~v~~~~~~~~~~~i~V~DtG~GI~~e~--------~~~iF~~F~r~~~~---- 430 (495)
..-|.+++.-+|.||+..--.| ..|.+.+ ..++ .|+|+|+|+|||-+. .+-||....-+++=
T Consensus 19 ~~gl~~i~~Eil~NavDe~~~~~~~~i~v~i--~~dg--~isV~ddG~GIPv~~h~~~~~~~~elif~~l~tg~nyd~~~ 94 (203)
T 3g7e_A 19 GTGLHHMVFEVVDNAIDEALAGHCKEIIVTI--HADN--SVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNS 94 (203)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE--CTTS--CEEEEECSSCCCCSCCTTTCCCHHHHHHHSTTCCSEECTTC
T ss_pred CCCCEEEEEEEEEEHHHHHCCCCCCEEEEEE--CCCC--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
T ss_conf 8727489998888344563159997689999--6799--79999899774564457669822068998984047788886
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC------CCEE---------------EEEEECCCCEEEEEEECHHH
Q ss_conf 6789998880589999999961------9859---------------99979899529889847247
Q gi|254780701|r 431 IKSAEQGVGLGLPIAQSIMANH------GGQF---------------LIRSKLREGVEVIAILPNTR 476 (495)
Q Consensus 431 ~~~~~~GtGLGLaIvk~lve~h------gG~i---------------~v~S~~G~Gt~f~v~LP~~~ 476 (495)
.+...+..|+|+.++--+.+.. +|.. .+.+....||++++.-..++
T Consensus 95 ~~~~gG~nG~G~kl~N~~S~~f~v~~~~~gk~~~q~f~~g~~~~~~~~~~~~~~~gT~V~F~PD~~~ 161 (203)
T 3g7e_A 95 YKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLET 161 (203)
T ss_dssp CEESCCCCSSCHHHHHHTEEEEEEEEEETTEEEEEEEETTEESSCCEEEEECSCCEEEEEEEECTTT
T ss_pred CEECCCCCCCCCEEEEEEEEEEEEEEEECCEEEEEEECCCEECCCCEECCCCCCCCEEEEEEECCCC
T ss_conf 1311675786728989862189999998999999998499298882352576899889999979310