HHsearch results for GI: 254780701 and protein with PDBid: 3jz3_A
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli}
Probab=100.00 E-value=6.9e-43 Score=384.73 Aligned_cols=213 Identities=25% Similarity=0.373 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 99999776420138999999999850336878937899999999999999999999999998742200156531011999
Q gi|254780701|r 251 RFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAISLID 330 (495)
Q Consensus 251 ~FlA~~SHELRTPL~aI~g~~elL~~~~~~~~~~~~~~~~l~~i~~s~~~L~~Li~~lLdlsrleag~~~l~~~~v~L~~ 330 (495)
+|++++||||||||++|.|++|++..... +++..++++..|.+++++|..+|+++|++||+|.+...++.+++++.+
T Consensus 4 ~F~a~iSHELrTPLt~I~~~~ell~~~~~---~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~~~~~~~~~~~~~~l~~ 80 (222)
T 3jz3_A 4 RFTSDAAHELRSPLTALKVQTEVAQLSDD---DPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLED 80 (222)
T ss_dssp ---------------------------------------CEECCC-CHHHHHHHHHHHHHHHTCCCSTTSTTCEEEEHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHH
T ss_conf 99999999982899999999999854799---989999999999999999999999999998763055646544442899
Q ss_pred HHHHHHHHHHHHHHHCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCC
Q ss_conf 99999999999997311221000367610104798999988777655688606798879999999769859999987899
Q gi|254780701|r 331 IVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGP 410 (495)
Q Consensus 331 li~~~~~~~~~~A~~~~~~l~~~~~~~~~~v~~D~~~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~ 410 (495)
++++++..+.+.+..+++.+.+..+++.+.+.+|+.+|+||+.|||+||+||||+||.|.|++. .+ . +.|+|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~l~~vl~NLl~NAikys~~~~~I~i~~~--~~-~--~~v~D~G~ 155 (222)
T 3jz3_A 81 LLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLN--AD-N--FIVRDNGP 155 (222)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEESSCSCEEEECHHHHHHHHHHHHHHHHHTCCTTCEEEEEEC--SS-E--EEEECSCC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE--EE-E--EEECCCCC
T ss_conf 9999999999999974957999707766468326999999999999999986899967999997--42-4--99835899
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECH
Q ss_conf 7898785442265231577767899988805899999999619859999798995298898472
Q gi|254780701|r 411 GIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPN 474 (495)
Q Consensus 411 GI~~e~~~~iF~~F~r~~~~~~~~~~GtGLGLaIvk~lve~hgG~i~v~S~~G~Gt~f~v~LP~ 474 (495)
|||++++++||+||||.++ +..+|+||||+|||+|+++|||+|+++|.+|+||+|+++|+-
T Consensus 156 GI~~e~~~~iFe~F~r~~~---~~~~G~GLGL~Ivk~iv~~hgG~I~v~s~~~~Gt~f~i~F~E 216 (222)
T 3jz3_A 156 GVTPEALARIGERFYRPPG---QTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSWLE 216 (222)
T ss_dssp -----------------------------CTHHHHHHHHHHTTCEEECCBCTTSSBEEEEECCC
T ss_pred CCCHHHHHHHCCCCCCCCC---CCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf 9899999986179741899---999952678999999999839989999779898799999773