HHsearch results for GI: 254780701 and protein with PDBid: 3na3_A
>3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens}
Probab=97.50 E-value=0.00081 Score=49.77 Aligned_cols=97 Identities=21% Similarity=0.283 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCC--C---CCCCCCCC-CC
Q ss_conf 999887776556886067988799999997698599999878997898785442265231577--7---67899988-80
Q gi|254780701|r 367 GMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSI--A---IKSAEQGV-GL 440 (495)
Q Consensus 367 ~L~qvl~NLi~NAiK~T~~gG~V~v~~~~~~~~~~~i~V~DtG~GI~~e~~~~iF~~F~r~~~--~---~~~~~~Gt-GL 440 (495)
.+.+++.-||.|||..- . ..|.|.+. .+|...|+|.|+|.||++++++.++++++-.-- . .+-..-|. |-
T Consensus 28 ~~~s~vkELieNsiDA~-A-t~I~i~i~--~~g~~~I~V~DnG~Gi~~~dl~~~~~~~~tSK~~~~~dl~~~~t~GfRGe 103 (348)
T 3na3_A 28 RPANAIKEMIENCLDAK-S-TSIQVIVK--EGGLKLIQIQDNGTGIRKEDLDIVCERFTTSKLQSFEDLASISTYGFRGE 103 (348)
T ss_dssp SHHHHHHHHHHHHHHTT-C-SEEEEEEE--GGGTSEEEEEECSCCCCGGGGGTTTSTTCCSSCCCC---------CCTTC
T ss_pred CHHHHHHHHHHHHHCCC-C-CEEEEEEE--CCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHH
T ss_conf 88999999986554489-9-88999999--89878999998998889899999975245767787554221026663289
Q ss_pred HHHHHHHHHHHCCCEEEEEEECC-CCEEEEEEE
Q ss_conf 58999999996198599997989-952988984
Q gi|254780701|r 441 GLPIAQSIMANHGGQFLIRSKLR-EGVEVIAIL 472 (495)
Q Consensus 441 GLaIvk~lve~hgG~i~v~S~~G-~Gt~f~v~L 472 (495)
+|+=.-.+ +++++.|+.. ......+.+
T Consensus 104 AL~sI~~~-----s~~~I~Sr~~~~~~~~~~~~ 131 (348)
T 3na3_A 104 ALASISHV-----AHVTITTKTADGKCAYRASY 131 (348)
T ss_dssp HHHHHHHS-----SEEEEEEECTTCSSEEEEEE
T ss_pred HHHHHHHH-----CCEEEEEECCCCCCCCEEEE
T ss_conf 99999851-----77499961256764617998