RPSBLAST alignment for GI: 254780701 and conserved domain: TIGR02938

>gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. Length = 494
 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 30/244 (12%)

Query: 242 AEEENLAKSR-FLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQH 300
           AEEE L   R  L++  H L+ P+N I     V++       N                 
Sbjct: 268 AEEERLEAIRETLSAAIHRLQGPMNLISAAISVLQRRGDDAGNPA--------------- 312

Query: 301 LLNLINEILDLSR--IEAGRYELSES------AISLIDIVRECIIMLQLRAQEKNIEIFQ 352
              ++ + L   R  +EA R  + +S       ++L  I+R+ I +   R     I +  
Sbjct: 313 SAAMLQQALSAGREHMEALRQVIPQSPQEIVVPVNLNQILRDVITLSTPRLLAAGIVVDW 372

Query: 353 KIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWTSGRGQYISIKDNG 409
           +   +L ++   E  +R +   L+ NA++   I G   R        +G    +SI D+G
Sbjct: 373 QPAATLPAILGRELQLRSLFKALVDNAIEAMNIKGWKRRELSITTALNGDLIVVSILDSG 432

Query: 410 PGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVI 469
           PGI +     V   F         + + +G+GL +AQ I+A+HGG   +     EG  +I
Sbjct: 433 PGIPQDLRYKVFEPF---FTTKGGSRKHIGMGLSVAQEIVADHGGIIDLDDDYSEGCRII 489

Query: 470 AILP 473
               
Sbjct: 490 VEFR 493