RPSBLAST alignment for GI: 254780701 and conserved domain: TIGR02938
>gnl|CDD|131984 TIGR02938, nifL_nitrog, nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes. Length = 494
Score = 59.9 bits (145), Expect = 1e-09
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 30/244 (12%)
Query: 242 AEEENLAKSR-FLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQH 300
AEEE L R L++ H L+ P+N I V++ N
Sbjct: 268 AEEERLEAIRETLSAAIHRLQGPMNLISAAISVLQRRGDDAGNPA--------------- 312
Query: 301 LLNLINEILDLSR--IEAGRYELSES------AISLIDIVRECIIMLQLRAQEKNIEIFQ 352
++ + L R +EA R + +S ++L I+R+ I + R I +
Sbjct: 313 SAAMLQQALSAGREHMEALRQVIPQSPQEIVVPVNLNQILRDVITLSTPRLLAAGIVVDW 372
Query: 353 KIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG---RVHVTVGWTSGRGQYISIKDNG 409
+ +L ++ E +R + L+ NA++ I G R +G +SI D+G
Sbjct: 373 QPAATLPAILGRELQLRSLFKALVDNAIEAMNIKGWKRRELSITTALNGDLIVVSILDSG 432
Query: 410 PGIAEGEIPTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVI 469
PGI + V F + + +G+GL +AQ I+A+HGG + EG +I
Sbjct: 433 PGIPQDLRYKVFEPF---FTTKGGSRKHIGMGLSVAQEIVADHGGIIDLDDDYSEGCRII 489
Query: 470 AILP 473
Sbjct: 490 VEFR 493