RPSBLAST alignment for GI: 254780701 and conserved domain: TIGR03785

>gnl|CDD|163497 TIGR03785, marine_sort_HK, proteobacterial dedicated sortase system histidine kinase. This histidine kinase protein is paired with an adjacent response regulator (TIGR03787) gene. It co-occurs with a variant sortase enzyme (TIGR03784), usually in the same gene neighborhood, in proteobacterial species most of which are marine, and with an LPXTG motif-containing sortase target conserved protein (TIGR03788). Sortases and LPXTG proteins are far more common in Gram-positive bacteria, where sortase systems mediate attachment to the cell wall or cross-linking of pilin structures. We give this predicted sensor histidine kinase the gene symbol psdS, for Proteobacterial Dedicated Sortase system Sensor histidine kinase. Length = 703
 Score = 54.0 bits (130), Expect = 8e-08
 Identities = 67/330 (20%), Positives = 141/330 (42%), Gaps = 40/330 (12%)

Query: 170 VVVALSTQAIMSMH------VLDISLAGMLATALSFFTYITYHLFKSNVKILSCQAEK-- 221
           V+   +T  I ++       + ++ LA M    L+ F + ++      ++ LS  AE   
Sbjct: 388 VIAEQTTNGIRTLRNSALEKLFNVILAIMSIGTLALFGFASW--ISWRIRRLSDDAEAAI 445

Query: 222 DD---LIAELEVAKS---LSDETRKRAEEENLAK----SRFLASMS----HELRTPLNAI 267
           D    +   +  ++S   + D +R  A+   +A+    + +L +MS    HELRTP+ A+
Sbjct: 446 DSQGRISGAIPASRSRDEIGDLSRSFAQM--VARLRQYTHYLENMSSRLSHELRTPV-AV 502

Query: 268 LGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIEAGRYELSESAIS 327
           +  S  +E   +  L  E  ++Y+       + L  ++N + + +R+E            
Sbjct: 503 VRSS--LENLELQALEQEK-QKYLERAREGTERLSMILNNMSEATRLEQAIQSAEVEDFD 559

Query: 328 LIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNLLSNAVKFTAIGG 387
           L +++  C+   Q+    +  E+     P +     +     Q++  L+ NA +F+   G
Sbjct: 560 LSEVLSGCMQGYQMTYPPQRFELNIPETPLVMRGSPELIA--QMLDKLVDNAREFSPEDG 617

Query: 388 RVHVTVGWTSGRGQY-ISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAEQG--VGLGLPI 444
            + V +  +  +    +++ + GP + E     +  S    S+  + A+    +GLGL I
Sbjct: 618 LIEVGL--SQNKSHALLTVSNEGPPLPEDMGEQLFDSM--VSVRDQGAQDQPHLGLGLYI 673

Query: 445 AQSIMANHGGQFLIRSKLR-EGVEVIAILP 473
            + I   H G+    ++ + +GV     LP
Sbjct: 674 VRLIADFHQGRIQAENRQQNDGVVFRISLP 703