RPSBLAST alignment of GI: 254780701 and protein with PDBid: 2c2a

>2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* Length = 258

 Score =  207 bits (529), Expect = 4e-54
 Identities = 73/250 (29%), Positives = 124/250 (49%), Gaps = 8/250 (3%)

Query: 241 RAEEENLAKSRFLASMSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQH 300
           R +  +  K+ F+A++SHELRTPL AI  ++E I   ++G L+  T KE++  I     H
Sbjct: 12  RLKRIDRMKTEFIANISHELRTPLTAIKAYAETI-YNSLGELDLSTLKEFLEVIIDQSNH 70

Query: 301 LLNLINEILDLSRIEAGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLS- 359
           L NL+NE+LD SR+E    +++   + L D+V   +  ++  A   N+ +  + +     
Sbjct: 71  LENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPV 130

Query: 360 SVWADEKGMRQVILNLLSNAVKFTAIGGRVHVTVGWTSGRGQY--ISIKDNGPGIAEGEI 417
             + D   +RQV+LNLL+N VK++               +     I ++DNG GI +   
Sbjct: 131 EAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAK 190

Query: 418 PTVLTSFGQGSIAIKSAEQGVGLGLPIAQSIMANHGGQFLIRSKLREGVEVIAILPNTRV 477
             +   F +   ++     G GLGL I + I+  HGG+  + S++ +G      +P  R 
Sbjct: 191 DRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDRA 250

Query: 478 LNFIPEDNHE 487
                EDN +
Sbjct: 251 ----GEDNRQ 256