RPSBLAST alignment of GI: 254780701 and protein with PDBid: 3a0r
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima} Length = 349
Score = 158 bits (401), Expect = 2e-39
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 256 MSHELRTPLNAILGFSEVIELETMGPLNNETYKEYIGDIHRSGQHLLNLINEILDLSRIE 315
++HE+R P+ I GF ++ P ET K+YI I L ++ EIL+ S+
Sbjct: 139 VAHEIRNPITIIGGFIMRMKKHLDDP---ETLKKYINIITNELSRLETIVKEILEYSK-- 193
Query: 316 AGRYELSESAISLIDIVRECIIMLQLRAQEKNIEIFQKIDPSLSSVWADEKGMRQVILNL 375
R L + +L +++RE ++ + + ++ NI+ + D V AD ++QV++NL
Sbjct: 194 -ERQVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINL 252
Query: 376 LSNAVKFTAIGGRVHVTVGWTSGRGQYISIKDNGPGIAEGEIPTVLTSFGQGSIAIKSAE 435
+ NA++ T G++ +T + + +S+ ++GP I E + + F
Sbjct: 253 VQNAIEATGENGKIKITSEDMYTKVR-VSVWNSGPPIPEELKEKIFSPFFTTK------T 305
Query: 436 QGVGLGLPIAQSIMAN-HGGQFLIRSKLREGVEVIAILP 473
QG GLGL I + I+ + HGG+ ++ GV I +P
Sbjct: 306 QGTGLGLSICRKIIEDEHGGKIWTENRE-NGVVFIFEIP 343