HHsearch alignment for GI: 254780703 and conserved domain: PRK11115

>PRK11115 transcriptional regulator PhoU; Provisional.
Probab=100.00  E-value=0  Score=372.12  Aligned_cols=226  Identities=33%  Similarity=0.529  Sum_probs=213.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             91137899999999999999999999999999999999964999999999847999999999999999999713976246
Q gi|254780703|r    1 MSCHILSAYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASD   80 (229)
Q Consensus         1 ~~~h~~~~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~D   80 (229)
T Consensus         6 ~~~Hi~~~fd~eL~~L~~~vl~Mg~~v~~~l~~a~~al~~~D~~lA~~Vi~~D~~Id~le~~Ie~~~~~llA~~qPvA~D   85 (236)
T PRK11115          6 LNKHISGQFNAELESIRTQVLTMGGLVEQQLSDAITAMHNQDAELAKRVIEGDHKVNMMEVAIDEACTRIIAKRQPTASD   85 (236)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             00244899999999999999999999999999999999876999999999865888999999999999998621995678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             55542599999999999999999999999831026531013344677999999998764432211258999999999999
Q gi|254780703|r   81 LREIVGSIKIAADLERIGDLAKNTAKRVLALQMFGVPRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGEL  160 (229)
Q Consensus        81 LR~i~~~~~i~~dlERIgD~a~~Ia~~~~~~~~~~~~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~i  160 (229)
T Consensus        86 LR~v~s~lki~~dLERIGD~a~~IAk~~~~~~~~-~~~~~~~~i~~m~~~~~~Ml~~al~af~~~D~~~A~~v~~~D~~V  164 (236)
T PRK11115         86 LRLVMAIIKTIADLERIGDVADKIARTALEKFSN-QQQPLLVSLESLGRHTIQMLHDVLDAFARMDLDEAVEIYKEDKKV  164 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999999871657-788657799999999999999999999817999999999989999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHH
Q ss_conf             9999999999998532178988999999999986879999999998666653102122311356031
Q gi|254780703|r  161 DAMHTSLFRELLTYMMEDPRNITLCTHLLFCSKNIERIGDHVTNIAETIHYMTTGVQPYKERVRKED  227 (229)
Q Consensus       161 d~l~~~l~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~iif~~tG~~~~~~~~~~~~  227 (229)
T Consensus       165 D~l~~~~~~~l~~~~~~~~~~~~~~~~ll~i~r~LERigDhatNIaE~viy~~tG~~vrH~~~~~~~  231 (236)
T PRK11115        165 DQEYEGIVRQLMTYMMEDPRTIPSVLTVLWCARSIERIGDRCQNICEYIIYFVKGKDVRHVGGDELD  231 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHH
T ss_conf             8999999999999998791359999999999999999999999999989866327111269878999