HHsearch results for GI: 254780703 and protein with PDBid: 1vct_A

>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=99.15  E-value=2.4e-10  Score=91.51  Aligned_cols=103  Identities=21%  Similarity=0.303  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             78999999999999999999999999999999999649999999998479999999999999999997139762465554
Q gi|254780703|r    5 ILSAYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREI   84 (229)
Q Consensus         5 ~~~~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i   84 (229)
                      ..+.|+.++..++..+.+|++++..|++.++.++..+|.+.|++|+..|+.+|.+..++...|+...  .+|  .|++.+
T Consensus         3 ~~~~~~~~~~~v~~~l~~m~~l~~~~i~~a~~al~~~d~~~a~~V~~~d~~vd~l~~~i~~~~~~~~--~~~--~d~~~~   78 (205)
T 1vct_A            3 EVEEFKYEPKSVKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQLMMHSVLAA--RNV--KEAEQV   78 (205)
T ss_dssp             ------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CSH--HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC--HHHHHH
T ss_conf             1778898899999999999999999999999999968999999999877888999999999999997--284--018999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             259999999999999999999999983
Q gi|254780703|r   85 VGSIKIAADLERIGDLAKNTAKRVLAL  111 (229)
Q Consensus        85 ~~~~~i~~dlERIgD~a~~Ia~~~~~~  111 (229)
                      .++++++.++|||||++.+|++.+...
T Consensus        79 ~~~l~i~~~~ErI~d~a~~ia~~v~~~  105 (205)
T 1vct_A           79 ITILQIANAIEDISNAAGDLAKMVLEG  105 (205)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999998888668998776777631