HHSEARCH alignment of GI: 254780703 and SCOP domain: d1sumb_

Alignment

Probab=100.00  E-value=3.2e-43  Score=324.67  Aligned_cols=214  Identities=29%  Similarity=0.421  Sum_probs=204.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             99999999999999999999999999999999964999999999847999999999999999999713976246555425
Q gi|254780703|r    7 SAYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVG   86 (229)
Q Consensus         7 ~~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~   86 (229)
                      +-|+++|+++++++.+||..|.+|+..++.+|.++|+++|++|++.|+.||.++.+|+++|+.++|++||+|+|||.+.+
T Consensus         2 r~~~~~l~~l~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~V~~~d~~Id~l~~~I~~~~~~~la~~~p~a~dlR~i~~   81 (225)
T d1sumb_           2 RLLNEKVEEFKKGVLKAGWFIEKMFRNSISSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTA   81 (225)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             62799999999999999999999999999999869999999999717779999999999999877116973257898778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999831026531013344677999999998764432211258999999999999999999
Q gi|254780703|r   87 SIKIAADLERIGDLAKNTAKRVLALQMFGVPRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTS  166 (229)
Q Consensus        87 ~~~i~~dlERIgD~a~~Ia~~~~~~~~~~~~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~  166 (229)
                      ++++++++|||||||.+||+.+..... ..+.+....+.+|++.+.+|+..+++||.++|.++|.++++.+++||++|++
T Consensus        82 ~l~i~~dlERIgD~a~~Ia~~~~~~~~-~~~~~~~~~i~~m~~~~~~m~~~a~~a~~~~d~~~a~~v~~~d~~id~l~~~  160 (225)
T d1sumb_          82 GIRVAELIENIADKCHDIAKNVLELME-EPPLKPLEDIPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEK  160 (225)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT-SCCCSCCSHHHHHHHHHHHHHHHHHHHHHSCCHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999988999988620-3565506799999999999999999999875699999999978889999999


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
Q ss_conf             9999998532178988999999999986879999999998666653102122311
Q gi|254780703|r  167 LFRELLTYMMEDPRNITLCTHLLFCSKNIERIGDHVTNIAETIHYMTTGVQPYKE  221 (229)
Q Consensus       167 l~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~iif~~tG~~~~~~  221 (229)
                      +++.++.++.++++++..++.+++++++||||||||+||||+|+|++||+.+++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~lERIgDh~~nIaE~v~y~~~G~~~~~~  215 (225)
T d1sumb_         161 VREELLLYMMESPKYVKRALLLLEIAGNIEIIADYATNIVEVSVYMVQGEAYKCY  215 (225)
T ss_dssp             HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEE
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf             9999999988598739999999999999999999999999999999818310115

SCOP domain information

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: PhoU-like
family: PhoU-like
domain: PhoU homolog TM1734
species: Thermotoga maritima [TaxId: 2336]