HHSEARCH alignment of GI: 254780703 and SCOP domain: d1vcta1

Alignment
>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.55  E-value=2.2e-14  Score=118.74  Aligned_cols=90  Identities=24%  Similarity=0.366  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999964999999999847999999999999999999713976246555425999999999
Q gi|254780703|r   16 LSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVGSIKIAADLE   95 (229)
Q Consensus        16 l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~~~~i~~dlE   95 (229)
                      ++..+.+|+..|.+|+..++.||.++|.+.|++|...|+.||.++.++...+..  +.++|  .|++.+.+++.+++++|
T Consensus         6 i~~~l~~M~~~~~~ml~~a~~a~~~~D~~~A~~v~~~d~~ID~l~~~i~~~l~~--~~~~~--~~~~~~~~~~~i~~~lE   81 (99)
T d1vcta1           6 VKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQLMMHSVL--AARNV--KEAEQVITILQIANAIE   81 (99)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSH--HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCC--CCHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999998789999999997047899999999999999--74693--00999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             99999999999999
Q gi|254780703|r   96 RIGDLAKNTAKRVL  109 (229)
Q Consensus        96 RIgD~a~~Ia~~~~  109 (229)
                      ||||||.|||+.+.
T Consensus        82 RIgDha~nIae~vi   95 (99)
T d1vcta1          82 DISNAAGDLAKMVL   95 (99)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             99999999999998


SCOP domain information

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: PhoU-like
family: PhoU-like
domain: Hypothetical protein PH0236, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]