Query gi|254780703|ref|YP_003065116.1| putative phosphate transport system protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 229
No_of_seqs 118 out of 1832
Neff 8.2
Searched_HMMs 13730
Date Wed Jun 1 08:04:47 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780703.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sumb_ a.7.12.1 (B:) PhoU hom 100.0 3.2E-43 0 324.7 27.1 214 7-221 2-215 (225)
2 d1xwma_ a.7.12.1 (A:) Phosphat 100.0 2.6E-42 0 318.2 25.1 211 8-219 1-211 (212)
3 d1t72a_ a.7.12.1 (A:) Phosphat 100.0 3.3E-41 2.8E-45 310.3 27.7 209 7-216 7-215 (215)
4 d1vcta1 a.7.12.1 (A:9-107) Hyp 99.6 2.2E-14 1.6E-18 118.7 10.9 90 16-109 6-95 (99)
5 d1vcta1 a.7.12.1 (A:9-107) Hyp 99.5 2.9E-13 2.1E-17 110.7 13.5 96 117-213 3-98 (99)
6 d1sumb_ a.7.12.1 (B:) PhoU hom 99.1 1.1E-09 8.3E-14 85.0 12.6 89 20-111 118-206 (225)
7 d1xwma_ a.7.12.1 (A:) Phosphat 99.1 1.4E-09 1E-13 84.4 11.8 96 119-214 8-106 (212)
8 d1t72a_ a.7.12.1 (A:) Phosphat 99.0 1.6E-09 1.2E-13 83.9 11.7 98 118-215 14-114 (215)
9 d1b5la_ a.26.1.3 (A:) Interfer 26.1 13 0.00097 13.1 6.2 76 128-204 54-133 (164)
10 d1wu3i_ a.26.1.3 (I:) Interfer 20.2 17 0.0013 12.3 7.1 56 112-167 34-91 (161)
No 1
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=3.2e-43 Score=324.67 Aligned_cols=214 Identities=29% Similarity=0.421 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 99999999999999999999999999999999964999999999847999999999999999999713976246555425
Q gi|254780703|r 7 SAYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVG 86 (229)
Q Consensus 7 ~~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~ 86 (229)
+-|+++|+++++++.+||..|.+|+..++.+|.++|+++|++|++.|+.||.++.+|+++|+.++|++||+|+|||.+.+
T Consensus 2 r~~~~~l~~l~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~V~~~d~~Id~l~~~I~~~~~~~la~~~p~a~dlR~i~~ 81 (225)
T d1sumb_ 2 RLLNEKVEEFKKGVLKAGWFIEKMFRNSISSLVERNESLAREVIADEEVVDQMEVEIQEKAMEVLGLFSPIGKPLLTVTA 81 (225)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 62799999999999999999999999999999869999999999717779999999999999877116973257898778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999831026531013344677999999998764432211258999999999999999999
Q gi|254780703|r 87 SIKIAADLERIGDLAKNTAKRVLALQMFGVPRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTS 166 (229)
Q Consensus 87 ~~~i~~dlERIgD~a~~Ia~~~~~~~~~~~~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~ 166 (229)
++++++++|||||||.+||+.+..... ..+.+....+.+|++.+.+|+..+++||.++|.++|.++++.+++||++|++
T Consensus 82 ~l~i~~dlERIgD~a~~Ia~~~~~~~~-~~~~~~~~~i~~m~~~~~~m~~~a~~a~~~~d~~~a~~v~~~d~~id~l~~~ 160 (225)
T d1sumb_ 82 GIRVAELIENIADKCHDIAKNVLELME-EPPLKPLEDIPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEK 160 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-SCCCSCCSHHHHHHHHHHHHHHHHHHHHHSCCHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999988999988620-3565506799999999999999999999875699999999978889999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
Q ss_conf 9999998532178988999999999986879999999998666653102122311
Q gi|254780703|r 167 LFRELLTYMMEDPRNITLCTHLLFCSKNIERIGDHVTNIAETIHYMTTGVQPYKE 221 (229)
Q Consensus 167 l~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~iif~~tG~~~~~~ 221 (229)
+++.++.++.++++++..++.+++++++||||||||+||||+|+|++||+.+++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~lERIgDh~~nIaE~v~y~~~G~~~~~~ 215 (225)
T d1sumb_ 161 VREELLLYMMESPKYVKRALLLLEIAGNIEIIADYATNIVEVSVYMVQGEAYKCY 215 (225)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEE
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf 9999999988598739999999999999999999999999999999818310115
No 2
>d1xwma_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=2.6e-42 Score=318.17 Aligned_cols=211 Identities=30% Similarity=0.445 Sum_probs=202.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999649999999998479999999999999999997139762465554259
Q gi|254780703|r 8 AYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVGS 87 (229)
Q Consensus 8 ~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~~ 87 (229)
+|+++|+++++++.+|+..|.+|+..++++|.++|++.|++|++.|+.||+++++|+++|+++++++||+|+|||.+.++
T Consensus 1 ~f~~~L~~l~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~ia~~~p~a~dlr~~~~~ 80 (212)
T d1xwma_ 1 TFADDLASLHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVNDFALWLIAAQQPVATDLRRIVAA 80 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 97999999999999999999999999999998699999999997268899999999999999885511105788988889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998310265310133446779999999987644322112589999999999999999999
Q gi|254780703|r 88 IKIAADLERIGDLAKNTAKRVLALQMFGVPRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSL 167 (229)
Q Consensus 88 ~~i~~dlERIgD~a~~Ia~~~~~~~~~~~~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l 167 (229)
+++++++|||||||.+||+.+..+.+.+.+ +.+.++.+|++.+.+|++.++++|.++|.+.|.++++.+++||++++++
T Consensus 81 ~~i~~~lERIgD~a~~Ia~~~~~~~~~~~~-~~~~~l~~m~~~~~~~~~~ai~a~~~~d~~~a~~i~~~~~~id~~~~~~ 159 (212)
T d1xwma_ 81 IKIASDIERIADFAVNIAKACIRIGGQPFV-MDIGPLVLMYRLATDMVSTAIAAYDREDASLAAQIADMDHRVDEQYGEM 159 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999998779999980356777-5520788998999999999999888765799999998899999999999
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
Q ss_conf 9999985321789889999999999868799999999986666531021223
Q gi|254780703|r 168 FRELLTYMMEDPRNITLCTHLLFCSKNIERIGDHVTNIAETIHYMTTGVQPY 219 (229)
Q Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~iif~~tG~~~~ 219 (229)
++.++.++.++++++..++.+++++++||||||||+||||+|+|++||++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~i~r~LERIgDh~~nIae~vif~~tG~~~~ 211 (212)
T d1xwma_ 160 MASLLAVAKTDAATLAQMNVLALVARYIERTADHATNIAEHLVYLVKGKHYD 211 (212)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999873987399999999999999999999999999999998430088
No 3
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00 E-value=3.3e-41 Score=310.29 Aligned_cols=209 Identities=34% Similarity=0.504 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 99999999999999999999999999999999964999999999847999999999999999999713976246555425
Q gi|254780703|r 7 SAYDEELDFLSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVG 86 (229)
Q Consensus 7 ~~f~~~L~~l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~ 86 (229)
-+|+++|+++++++.+|+..|..++..++++|.++|.+.+++|++.|+.||.++.+|+++|+.++++++|+|+|||++.+
T Consensus 7 ~~~~~~L~~l~~~l~~M~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~l~~~~p~a~dlr~~~~ 86 (215)
T d1t72a_ 7 MKLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIALYQPEAGDLRMIMG 86 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 30999999999999999999999999999999879999999999748888889999999999888615745678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999831026531013344677999999998764432211258999999999999999999
Q gi|254780703|r 87 SIKIAADLERIGDLAKNTAKRVLALQMFGVPRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTS 166 (229)
Q Consensus 87 ~~~i~~dlERIgD~a~~Ia~~~~~~~~~~~~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~ 166 (229)
++++++++|||||||.+||+.+..... ..+.+...++.+|++.+.+|+..++++|.++|.+.|.++++.+++||++|++
T Consensus 87 ~~~i~~~lERIgD~a~~ia~~~~~~~~-~~~~~~~~~l~~m~~~v~~m~~~a~~a~~~~d~~~a~~v~~~d~~id~~~~~ 165 (215)
T d1t72a_ 87 IYKIVSDLERMGDEAENIAERAILLAE-EPPLKPYVNINFMSEIVKEMVNDSVISFIQQDTLLAKKVIEKDDTVDELYHQ 165 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-SCCSSCCHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 998989999999999999999997313-5885246789999999999999999998736899999999985668999999
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
Q ss_conf 99999985321789889999999999868799999999986666531021
Q gi|254780703|r 167 LFRELLTYMMEDPRNITLCTHLLFCSKNIERIGDHVTNIAETIHYMTTGV 216 (229)
Q Consensus 167 l~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~iif~~tG~ 216 (229)
+++.++.++.++++++..++.+++++|+||||||||+||||+|+|++||+
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~~~~~i~r~lERigDh~~nIae~viy~~tG~ 215 (215)
T d1t72a_ 166 LERELMTYVLEDPRNIKRAMHLSFVARHYERIADHAENVAEAAIYLSEGE 215 (215)
T ss_dssp HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999884988499999999999999999999999999999998489
No 4
>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.55 E-value=2.2e-14 Score=118.74 Aligned_cols=90 Identities=24% Similarity=0.366 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999964999999999847999999999999999999713976246555425999999999
Q gi|254780703|r 16 LSRRIVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVGSIKIAADLE 95 (229)
Q Consensus 16 l~~~i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~~~~i~~dlE 95 (229)
++..+.+|+..|.+|+..++.||.++|.+.|++|...|+.||.++.++...+.. +.++| .|++.+.+++.+++++|
T Consensus 6 i~~~l~~M~~~~~~ml~~a~~a~~~~D~~~A~~v~~~d~~ID~l~~~i~~~l~~--~~~~~--~~~~~~~~~~~i~~~lE 81 (99)
T d1vcta1 6 VKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQLMMHSVL--AARNV--KEAEQVITILQIANAIE 81 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCC--CCHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999998789999999997047899999999999999--74693--00999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780703|r 96 RIGDLAKNTAKRVL 109 (229)
Q Consensus 96 RIgD~a~~Ia~~~~ 109 (229)
||||||.|||+.+.
T Consensus 82 RIgDha~nIae~vi 95 (99)
T d1vcta1 82 DISNAAGDLAKMVL 95 (99)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999998
No 5
>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.50 E-value=2.9e-13 Score=110.65 Aligned_cols=96 Identities=9% Similarity=0.083 Sum_probs=88.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 31013344677999999998764432211258999999999999999999999999853217898899999999998687
Q gi|254780703|r 117 PRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSLFRELLTYMMEDPRNITLCTHLLFCSKNIE 196 (229)
Q Consensus 117 ~~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l~~~~~~~l~~~~~~~~~~~~~~~i~r~lE 196 (229)
|..+.+.+.+|+..+..|+..++.||.++|.+.|..++..|+.||+++..+.+.++..+. +|.++..++.++.++++||
T Consensus 3 p~~i~~~l~~M~~~~~~ml~~a~~a~~~~D~~~A~~v~~~d~~ID~l~~~i~~~l~~~~~-~~~~~~~~~~~~~i~~~lE 81 (99)
T d1vcta1 3 PKSVKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQLMMHSVLAAR-NVKEAEQVITILQIANAIE 81 (99)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHH
T ss_conf 840999999999999999999999998789999999997047899999999999999746-9300999999999999999
Q ss_pred HHHHHHHHHHHHHHHHE
Q ss_conf 99999999986666531
Q gi|254780703|r 197 RIGDHVTNIAETIHYMT 213 (229)
Q Consensus 197 RigDh~~nIae~iif~~ 213 (229)
||||||+|||++|++.+
T Consensus 82 RIgDha~nIae~vi~~i 98 (99)
T d1vcta1 82 DISNAAGDLAKMVLEGV 98 (99)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999998665
No 6
>d1sumb_ a.7.12.1 (B:) PhoU homolog TM1734 {Thermotoga maritima [TaxId: 2336]}
Probab=99.10 E-value=1.1e-09 Score=85.03 Aligned_cols=89 Identities=19% Similarity=0.303 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999649999999998479999999999999999997139762465554259999999999999
Q gi|254780703|r 20 IVEMGIVSRKMVDSSVRAFIEGDTVLAHKVIDNDVVLDQLERDIGDKAIITIAKRQPMASDLREIVGSIKIAADLERIGD 99 (229)
Q Consensus 20 i~~m~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~~~~~I~~~~~~lLa~~qPva~DLR~i~~~~~i~~dlERIgD 99 (229)
+..|+..|.+|+..+++++.+.|.+.|.++...|+.||.++..+.+..+..+.. .|- .....+.++-++++||||||
T Consensus 118 i~~m~~~~~~m~~~a~~a~~~~d~~~a~~v~~~d~~id~l~~~~~~~~~~~~~~-~~~--~~~~~~~~~~i~~~lERIgD 194 (225)
T d1sumb_ 118 IPAMANQTSEMLKFALRMFADVNVEKSFEVCRMDSKVDDLYEKVREELLLYMME-SPK--YVKRALLLLEIAGNIEIIAD 194 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH-CGG--GHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC--CHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999987569999999997888999999999999999885-987--39999999999999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999983
Q gi|254780703|r 100 LAKNTAKRVLAL 111 (229)
Q Consensus 100 ~a~~Ia~~~~~~ 111 (229)
||.|||+.+..+
T Consensus 195 h~~nIaE~v~y~ 206 (225)
T d1sumb_ 195 YATNIVEVSVYM 206 (225)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 7
>d1xwma_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.06 E-value=1.4e-09 Score=84.45 Aligned_cols=96 Identities=18% Similarity=0.290 Sum_probs=78.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C--CCHHHHHHHHHHHHHH
Q ss_conf 013344677999999998764432211258999999999999999999999999853217-8--9889999999999868
Q gi|254780703|r 119 KLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSLFRELLTYMMED-P--RNITLCTHLLFCSKNI 195 (229)
Q Consensus 119 ~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l~~~~~~~l~~~-~--~~~~~~~~~~~i~r~l 195 (229)
.+...+..|+..|..|+..++++|.++|.+.|..+.+.|+.||.++..+...++..+... | .+....+.++.+++.|
T Consensus 8 ~l~~~i~~M~~~v~~~l~~a~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~ia~~~p~a~dlr~~~~~~~i~~~l 87 (212)
T d1xwma_ 8 SLHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVNDFALWLIAAQQPVATDLRRIVAAIKIASDI 87 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999986999999999972688999999999999998855111057889888899999999
Q ss_pred HHHHHHHHHHHHHHHHHEE
Q ss_conf 7999999999866665310
Q gi|254780703|r 196 ERIGDHVTNIAETIHYMTT 214 (229)
Q Consensus 196 ERigDh~~nIae~iif~~t 214 (229)
|||||||.|||+.+..+..
T Consensus 88 ERIgD~a~~Ia~~~~~~~~ 106 (212)
T d1xwma_ 88 ERIADFAVNIAKACIRIGG 106 (212)
T ss_dssp HHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHCC
T ss_conf 9999999877999998035
No 8
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=99.05 E-value=1.6e-09 Score=83.90 Aligned_cols=98 Identities=16% Similarity=0.288 Sum_probs=82.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C--CCHHHHHHHHHHHHH
Q ss_conf 1013344677999999998764432211258999999999999999999999999853217-8--988999999999986
Q gi|254780703|r 118 RKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSLFRELLTYMMED-P--RNITLCTHLLFCSKN 194 (229)
Q Consensus 118 ~~~~~~l~~m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l~~~~~~~l~~~-~--~~~~~~~~~~~i~r~ 194 (229)
..+...+..|+..|..|+..++++|.++|.+.|.++.+.|+.||.++..+.+..+..+... | .+....+.++.+++.
T Consensus 14 ~~l~~~l~~M~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~~~~~~l~~~~p~a~dlr~~~~~~~i~~~ 93 (215)
T d1t72a_ 14 EETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIERRCIRMIALYQPEAGDLRMIMGIYKIVSD 93 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998799999999997488888899999999998886157456789999999989899
Q ss_pred HHHHHHHHHHHHHHHHHHEEC
Q ss_conf 879999999998666653102
Q gi|254780703|r 195 IERIGDHVTNIAETIHYMTTG 215 (229)
Q Consensus 195 lERigDh~~nIae~iif~~tG 215 (229)
||||||||.|||+.+.....+
T Consensus 94 lERIgD~a~~ia~~~~~~~~~ 114 (215)
T d1t72a_ 94 LERMGDEAENIAERAILLAEE 114 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999973135
No 9
>d1b5la_ a.26.1.3 (A:) Interferon-tau {Sheep (Ovis aries) [TaxId: 9940]}
Probab=26.12 E-value=13 Score=13.11 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHH--HHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999998764432211258999999999999999999999999853217--89889--99999999986879999999
Q gi|254780703|r 128 AELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSLFRELLTYMMED--PRNIT--LCTHLLFCSKNIERIGDHVT 203 (229)
Q Consensus 128 ~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l~~~~~~~l~~~--~~~~~--~~~~~~~i~r~lERigDh~~ 203 (229)
...+.+|+...+.-|.+.....+-.-...+.-...++..+ ..+-..+.+. ..+.. ..-..+-+-+||-||..|..
T Consensus 54 ~~~~~emlqqif~LF~~~~s~a~W~~t~le~fl~~L~~Ql-~~Le~Cl~~~~~~~~~~~~~~~~~l~lk~YF~rI~~yLk 132 (164)
T d1b5la_ 54 FPVLYEMLQQSFNLFYTEHSSAAWDTTLLEQLCTGLQQQL-DHLDTCRGQVMGEEDSELGNMDPIVTVKKYFQGIYDYLQ 132 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHH-HHHHHHCC------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9999999999999983799710057999999999999999-999999898735645676776415799999999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780703|r 204 N 204 (229)
Q Consensus 204 n 204 (229)
+
T Consensus 133 ~ 133 (164)
T d1b5la_ 133 E 133 (164)
T ss_dssp H
T ss_pred H
T ss_conf 5
No 10
>d1wu3i_ a.26.1.3 (I:) Interferon-beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.22 E-value=17 Score=12.33 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=23.8
Q ss_pred HCCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 102653101334467--79999999987644322112589999999999999999999
Q gi|254780703|r 112 QMFGVPRKLVWTIEP--LAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSL 167 (229)
Q Consensus 112 ~~~~~~~~~~~~l~~--m~~~v~~m~~~a~~af~~~d~~~a~~i~~~e~~id~l~~~l 167 (229)
.++.+|.+....+.+ ....+.+|+..++.-|.+.....+-.-...|.-...++..+
T Consensus 34 ~dF~fP~e~~~q~Qk~~a~~v~~emlQqif~LF~~~~ssa~Wnet~le~fl~~L~~Ql 91 (161)
T d1wu3i_ 34 ADFKIPMEMTEKMQKSYTAFAIQEMLQNVFLVFRNNFSSTGWNETIVVRLLDELHQQT 91 (161)
T ss_dssp CCCCCCGGGGSCCCHHHHHHHHHHHHHHHHHHTTSCCGGGTCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8999938887502399999999999999999986678713377899999999999999
Done!