RPSBLAST alignment of GI: 254780703 and SCOP domain: d1vcta1

Alignment

>d1vcta1 a.7.12.1 (A:9-107) Hypothetical protein PH0236, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Length = 99

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 8/93 (8%), Positives = 28/93 (30%), Gaps = 1/93 (1%)

Query: 117 PRKLVWTIEPLAELSLEQLSEILDVYGSRSTEKTQSICNRDGELDAMHTSLFRELLTYMM 176
           P+ +      + +     +            E  + +   +  +D ++            
Sbjct: 3   PKSVKEIFIEMKDTVELMVDLAYASLLFGDKEIAEEVLELEERIDLLNYQ-LMMHSVLAA 61

Query: 177 EDPRNITLCTHLLFCSKNIERIGDHVTNIAETI 209
            + +       +L  +  IE I +   ++A+ +
Sbjct: 62  RNVKEAEQVITILQIANAIEDISNAAGDLAKMV 94

SCOP domain information

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: PhoU-like
family: PhoU-like
domain: Hypothetical protein PH0236, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]