RPSBLAST alignment for GI: 254780704 and conserved domain: TIGR03411
>gnl|CDD|163251 TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Length = 242
Score = 87.6 bits (218), Expect = 3e-18
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 38/258 (14%)
Query: 11 KVSVCYGEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFT----- 65
+SV + +AL D++L + + +IGP+G GK+T + D V T
Sbjct: 7 GLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMM----------D--VITGKTRP 54
Query: 66 --GEIILDGKNIYQSSVDVVRL-RARVGMVFQRPNPFPK-SIYDN----VAYGPRIHGL- 116
G ++ G ++ + + ++ RA +G FQ+P F ++++N + +
Sbjct: 55 DEGSVLFGGTDL--TGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASL 112
Query: 117 --GNNKADIDQIVEMSLKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILM 174
+ + D+I E+ L+ L +E DRL A LLS GQ+Q + I L +P+++L+
Sbjct: 113 FFRLSAEEKDRIEEV-LETIGLADEA-DRL---AGLLSHGQKQWLEIGMLLMQDPKLLLL 167
Query: 175 DEPCSALDPIATASVEELIHELRESLTIVIVTHSMQQAARVSQRAAMFHMGHLVEEDDTD 234
DEP + + T EL+ L ++V+V H M+ ++ + + H G ++ E D
Sbjct: 168 DEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLD 227
Query: 235 KMFTAPSDQRTQDYIMGR 252
++ +D R + +GR
Sbjct: 228 QV---QADPRVIEVYLGR 242