RPSBLAST alignment for GI: 254780704 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 84.4 bits (209), Expect = 3e-17
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 16 YGEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNI 75
GE AL D++ ++P+ LIG +G GKST LR L + +G + + G+
Sbjct: 32 VGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP-----DSGTVTVRGR-- 84
Query: 76 YQSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKAD--IDQIVEMSLKK 133
V +G F P + +N+ R+ GL + D ID+I+E
Sbjct: 85 -------VSSLLGLGGGFN-PE---LTGRENIYLNGRLLGLSRKEIDEKIDEIIE----- 128
Query: 134 ASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELI 193
F+E+ D + S G + R+ A A A+ P+++L+DE + D + +
Sbjct: 129 ---FSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRL 185
Query: 194 HELRE-SLTIVIVTHSMQQAARVSQRAAMFHMGHLVEED 231
EL + T+++V+H R+ RA + G + +
Sbjct: 186 RELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224