RPSBLAST alignment for GI: 254780704 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 139 bits (352), Expect = 7e-34
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 52/208 (25%)
Query: 10 NKVSVCY--GEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGE 67
VS Y K L D++L I A++GPSG GKST L+ L R+ + +GE
Sbjct: 4 KNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYD-----PTSGE 58
Query: 68 IILDGKNIYQSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIV 127
I++DG ++ +D+ LR + V Q P F +I +N
Sbjct: 59 ILIDGVDL--RDLDLESLRKNIAYVPQDPFLFSGTIREN--------------------- 95
Query: 128 EMSLKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATA 187
+LSGGQ+QR+ IARAL +P ++++DE SALDP A
Sbjct: 96 ----------------------ILSGGQRQRIAIARALLRDPPILILDEATSALDPETEA 133
Query: 188 SVEELIHELRESLTIVIVTHSMQQAARV 215
+ E + L + T++++ H +
Sbjct: 134 LILEALRALAKGKTVIVIAHRLSTIRDA 161