RPSBLAST alignment for GI: 254780704 and conserved domain: cd03229

>gnl|CDD|72988 cd03229, ABC_Class3, This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 178
 Score =  184 bits (469), Expect = 2e-47
 Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 48/223 (21%)

Query: 7   MISNKVSVCYGEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTG 66
           +    VS  YG+K  L D++L I    + AL+GPSG GKST LRC+  + E       +G
Sbjct: 1   LELKNVSKRYGQKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPD-----SG 55

Query: 67  EIILDGKNIYQSSVDVVRLRARVGMVFQRPNPFP-KSIYDNVAYGPRIHGLGNNKADIDQ 125
            I++DG+++     ++  LR R+GMVFQ    FP  ++ +N+A G               
Sbjct: 56  SILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPHLTVLENIALG--------------- 100

Query: 126 IVEMSLKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIA 185
                                    LSGGQQQRV +ARALA++P+V+L+DEP SALDPI 
Sbjct: 101 -------------------------LSGGQQQRVALARALAMDPDVLLLDEPTSALDPIT 135

Query: 186 TASVEELIHELRESL--TIVIVTHSMQQAARVSQRAAMFHMGH 226
              V  L+  L+  L  T+V+VTH + +AAR++ R  +   G 
Sbjct: 136 RREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178