RPSBLAST alignment for GI: 254780704 and conserved domain: cd03236

>gnl|CDD|72995 cd03236, ABC_RNaseL_inhibitor_domain1, The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 255
 Score = 53.3 bits (128), Expect = 6e-08
 Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 26/205 (12%)

Query: 16  YGEKR-ALFDINLKIPQ-NSVTALIGPSGCGKSTFLRCLNRMNETIDN-CVFTGE----I 68
           YG     L    L +P+   V  L+GP+G GKST L+ L    +   N   F        
Sbjct: 10  YGPNSFKLH--RLPVPREGQVLGLVGPNGIGKSTALKILA--GKLKPNLGKFDDPPDWDE 65

Query: 69  ILD---GKNIYQSSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQ 125
           ILD   G  +      ++    +V +  Q  +  PK++   V       G    K D   
Sbjct: 66  ILDEFRGSELQNYFTKLLEGDVKVIVKPQYVDLIPKAVKGKV-------GELLKKKDERG 118

Query: 126 IVEMSLKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIA 185
            ++  + +  L   V DR   +   LSGG+ QRV IA ALA + +    DEP S LD   
Sbjct: 119 KLDELVDQLEL-RHVLDR---NIDQLSGGELQRVAIAAALARDADFYFFDEPSSYLDIKQ 174

Query: 186 TASVEELIHEL-RESLTIVIVTHSM 209
             +   LI EL  +   +++V H +
Sbjct: 175 RLNAARLIRELAEDDNYVLVVEHDL 199