RPSBLAST alignment for GI: 254780704 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 104 bits (262), Expect = 2e-23
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 18 EKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIYQ 77
E AL +++L I A+IG G GKST L+ L + + G ++LDG +I Q
Sbjct: 16 EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTS-----GSVLLDGTDIRQ 70
Query: 78 SSVDVVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIVEMS------- 130
+D LR +G V Q F ++ DN+ G + + I + E++
Sbjct: 71 --LDPADLRRNIGYVPQDVTLFYGTLRDNITLGAPLA----DDERILRAAELAGVTDFVN 124
Query: 131 LKKASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVE 190
L ++ +R LSGGQ+Q V +ARAL +P ++L+DEP SA+D S E
Sbjct: 125 KHPNGLDLQIGER----GRGLSGGQRQAVALARALLNDPPILLLDEPTSAMD---MNSEE 177
Query: 191 ELIHELRESL---TIVIVTHSM 209
L LR+ L T++I+TH
Sbjct: 178 RLKERLRQLLGDKTLIIITHRP 199