RPSBLAST alignment for GI: 254780704 and conserved domain: cd03248

>gnl|CDD|73007 cd03248, ABCC_TAP, TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.. Length = 226
 Score =  105 bits (264), Expect = 1e-23
 Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 20/202 (9%)

Query: 22  LFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIYQSSVD 81
           L D++  +    VTAL+GPSG GKST +  L    +        G+++LDGK I  S  +
Sbjct: 30  LQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQG-----GQVLLDGKPI--SQYE 82

Query: 82  VVRLRARVGMVFQRPNPFPKSIYDNVAYGPRIHGLGNNKADIDQIVEMSLK--KASLFNE 139
              L ++V +V Q P  F +S+ DN+AYG     L +     + + E + K    S  +E
Sbjct: 83  HKYLHSKVSLVGQEPVLFARSLQDNIAYG-----LQS--CSFECVKEAAQKAHAHSFISE 135

Query: 140 VKDRLFHDA----SLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELIHE 195
           +      +     S LSGGQ+QRV IARAL  NP+V+++DE  SALD  +   V++ +++
Sbjct: 136 LASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAESEQQVQQALYD 195

Query: 196 LRESLTIVIVTHSMQQAARVSQ 217
             E  T++++ H +    R  Q
Sbjct: 196 WPERRTVLVIAHRLSTVERADQ 217