RPSBLAST alignment for GI: 254780704 and conserved domain: cd03293

>gnl|CDD|73052 cd03293, ABC_NrtD_SsuB_transporters, NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 220
 Score =  163 bits (415), Expect = 4e-41
 Identities = 75/223 (33%), Positives = 119/223 (53%), Gaps = 23/223 (10%)

Query: 17  GEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIY 76
           G   AL DI+L + +    AL+GPSGCGKST LR +  +         +GE+++DG+   
Sbjct: 15  GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER-----PTSGEVLVDGE--- 66

Query: 77  QSSVDVVRLRARVGMVFQRPNPFP-KSIYDNVAYGPRIHGLGNNKADIDQIVEMSLKKAS 135
                V       G VFQ+    P  ++ DNVA G  + G+   KA+  +  E  L+   
Sbjct: 67  ----PVTGPGPDRGYVFQQDALLPWLTVLDNVALGLELQGVP--KAEARERAEELLELVG 120

Query: 136 LFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELIHE 195
           L +  ++   H    LSGG +QRV +ARALAV+P+V+L+DEP SALD +    ++E + +
Sbjct: 121 L-SGFENAYPHQ---LSGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLD 176

Query: 196 L--RESLTIVIVTHSMQQAARVSQRAAMF--HMGHLVEEDDTD 234
           +      T+++VTH + +A  ++ R  +     G +V E + D
Sbjct: 177 IWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219