RPSBLAST alignment for GI: 254780704 and conserved domain: cd03294

>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
 Score =  150 bits (380), Expect = 4e-37
 Identities = 77/240 (32%), Positives = 137/240 (57%), Gaps = 16/240 (6%)

Query: 17  GEKRALFDINLKIPQNSVTALIGPSGCGKSTFLRCLNRMNETIDNCVFTGEIILDGKNIY 76
           G+   + D++L + +  +  ++G SG GKST LRC+NR+ E       +G++++DG++I 
Sbjct: 35  GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT-----SGKVLIDGQDIA 89

Query: 77  QSSVDVVR--LRARVGMVFQRPNPFP-KSIYDNVAYGPRIHGLGNNKADIDQIVEMSLKK 133
             S   +R   R ++ MVFQ     P +++ +NVA+G  + G+   +A+ ++    +L+ 
Sbjct: 90  AMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVP--RAEREERAAEALEL 147

Query: 134 ASLFNEVKDRLFHDASLLSGGQQQRVCIARALAVNPEVILMDEPCSALDPIATASVEELI 193
             L    +         LSGG QQRV +ARALAV+P+++LMDE  SALDP+    +++ +
Sbjct: 148 VGL----EGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDEL 203

Query: 194 HELRESL--TIVIVTHSMQQAARVSQRAAMFHMGHLVEEDDTDKMFTAPSDQRTQDYIMG 251
             L+  L  TIV +TH + +A R+  R A+   G LV+    +++ T P++   +++  G
Sbjct: 204 LRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVREFFRG 263