HHsearch alignment for GI: 254780705 and conserved domain: COG0390
>COG0390 ABC-type uncharacterized transport system, permease component [General function prediction only].
Probab=94.46 E-value=0.35 Score=26.29 Aligned_cols=41 Identities=12% Similarity=-0.030 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 689999999985110678989987077212777788397533
Q gi|254780705|r 292 PSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAM 333 (425)
Q Consensus 292 P~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~ 333 (425)
T Consensus 140 ~L~~~~l~~~i~~-~~~eie~~LsLGaTp~~A~~~~~r~Air 180 (256)
T COG0390 140 SLAYERLVSEIIS-EKDEIEAKLSLGATPKEASRPYIRSAIR 180 (256)
T ss_pred HHHHHHHHHHHHC-CHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 5578888999740-3899999985289889997999999888