HHsearch alignment for GI: 254780705 and conserved domain: COG0395
>COG0395 UgpE ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].
Probab=99.72 E-value=3.9e-14 Score=108.86 Aligned_cols=202 Identities=23% Similarity=0.217 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf 02667899999999999999999999999998643730245678989988765336999999999999862666300468
Q gi|254780705|r 202 GIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTALV 281 (425)
Q Consensus 202 Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~~l~ 281 (425)
T Consensus 70 ~~~~~~~NS~iva~~~t~l~~~~~~laaYalar~~f~g--~~~l~~~~l~~~m~P~~v~-~iPl~~~~~~lgl~n-t~~g 145 (281)
T COG0395 70 GFLRYFLNSLIVAVGSTVLSLLLSSLAAYALARFRFKG--RKLLFLLLLLTLMLPAQVL-LIPLYLLMRKLGLLN-TYWG 145 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCHH-HHHH
T ss_conf 89999998999999999999999999899999853360--9999999999998569999-998999999826610-4799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q ss_conf 9753345436689999999985110678989987077212777788397533258999999999987677-999998543
Q gi|254780705|r 282 GGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGET-APLLFVGMV 360 (425)
Q Consensus 282 g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEt-a~ll~~~~~ 360 (425)
T Consensus 146 lil~~~~~~~pf~ifl~~~ff~~iP~eLeEAA~iDGas~~~if~kI~lPl~~P~iaa~aI~~fi~~WN~fl~pli~~~~- 224 (281)
T COG0395 146 LILPYLAFGLPFAIFLLRQFFRTIPKELEEAARIDGASEFQIFFKIVLPLAKPGLAAVAIFTFIGAWNEFLWPLILLSS- 224 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf 9999999988899999999998698999999998289657899999987037899999999999999999999999188-
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 210136656134455799999986036-65006999999999999999999999999999
Q gi|254780705|r 361 AFVTDYPVGVTDIATAFPVQIYLWAAD-AERPFVERTFGAILLLLIFLAVINTAMLWLRN 419 (425)
Q Consensus 361 ~~~~~~p~~~~~p~~tlp~~Iy~~~~~-~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~ 419 (425)
T Consensus 225 -----------~~~~tl~v~l~~~~~~~~~~~w~~~~A~~vi~~lP~li~f~~~Qr~~v~ 273 (281)
T COG0395 225 -----------PNLLTLPVGLNSFGGSEGGTDWGLIMAAAVLAILPVLIVFLFFQRYFVR 273 (281)
T ss_pred -----------CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -----------7642199999996343356668999999999999999999999999999