HHsearch alignment for GI: 254780705 and conserved domain: COG0601
>COG0601 DppB ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].
Probab=99.34 E-value=1.1e-08 Score=74.16 Aligned_cols=216 Identities=18% Similarity=0.157 Sum_probs=155.2
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32134432110120266789999999999999999999999999864373024567898998876533699999999999
Q gi|254780705|r 189 FFINGASSRPEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVL 268 (425)
Q Consensus 189 f~t~~~s~~~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~ 268 (425)
T Consensus 77 fG~S~~~~~pV~~~I~~~lp~Tl~L~~~a~iis~~lgi~LG~~aa~~-~~~~~D~~~~~~~~~~~siP~F~~~~lli~~f 155 (317)
T COG0601 77 FGTSFVYKRPVADLILERLPATLELALVALILAVLLGIPLGILAALK-RGSWIDRLLRVLSLLGISIPSFWLGLLLILLF 155 (317)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87335679968999998849999999999999999999999999944-89759999999999999602999999999999
Q ss_pred HHHHCC---CC--------------CHHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 986266---63--------------00468975334543668999999998-5110678989987077212777788397
Q gi|254780705|r 269 INFFKM---PR--------------STALVGGLILALMTLPSIIIATGVAL-RTVPSSIRSAALGLGASKVQTVFHHVLP 330 (425)
Q Consensus 269 ~~~~~~---~~--------------~~~l~g~~~l~~m~lP~i~~~~~~al-~~vp~~~~eaa~~LGas~~~~~~~v~lp 330 (425)
T Consensus 156 ~~~l~~~P~~g~~~~~~~~~~~~~~~h~iLP~~~L~~~~~a~~~r~~R~~~~e~l~~dyV~~AraKGl~~~~i~~kH~lr 235 (317)
T COG0601 156 SVKLGWLPVGGRGSAGSWDSFLDALKHLILPALTLGLVSLAGIARLTRSSMLEVLNQDYVRTARAKGLSERRILFKHALR 235 (317)
T ss_pred HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH
T ss_conf 99967689888788651567999999999999999999999999999999999986689999998799925103986337
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 53325899999999998767799999854321013665613445579999998603665006999999999999999999
Q gi|254780705|r 331 LAMPAILTGSTVSLARALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVI 410 (425)
Q Consensus 331 ~a~pgi~~g~il~~~ra~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~ 410 (425)
T Consensus 236 Na~iP~vt~~~~~~~~ll~GavivE------~iF~~pG--------iG~l~~~Ai~~~---D~p~i~g~~~~~~~~~i~~ 298 (317)
T COG0601 236 NALLPVITVLGLQLGGLLGGAVVVE------TVFSWPG--------LGRLLVDAILNR---DYPVVQGIVLVIALLVILG 298 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHH------HHCCCCC--------HHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHH
T ss_conf 6488899999999999984687873------5408778--------499999999824---8499999999999999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999741
Q gi|254780705|r 411 NTAMLWLRNRFK 422 (425)
Q Consensus 411 n~~a~~lr~r~~ 422 (425)
T Consensus 299 nli~Dily~~lD 310 (317)
T COG0601 299 NLLVDILYALLD 310 (317)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999649