HHsearch alignment for GI: 254780705 and conserved domain: COG1175
>COG1175 UgpA ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].
Probab=99.74 E-value=4.9e-15 Score=114.57 Aligned_cols=210 Identities=18% Similarity=0.152 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Q ss_conf 2026678999999999999999999999999986437302456789899887653369999999999998----------
Q gi|254780705|r 201 AGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLIN---------- 270 (425)
Q Consensus 201 ~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~---------- 270 (425)
T Consensus 64 ~~f~~al~nT~~~~~~~v~~~~~lgl~lAlll~~~---~~g~~~~r~~~~lP~~~~~vv~~~iw~~l~~~~~G~~n~~l~ 140 (295)
T COG1175 64 PTFWNALKNTLVFTVISVPLQLVLGLLLALLLNRK---LRGRGFFRTLFFLPWAISSVVAGLIWKWLFNPSFGLLNSLLL 140 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 47999999999999999999999999999998470---447999999999998999999999999998876358999999
Q ss_pred HHCCCC-CHHH--------HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 626663-0046--------8975334543668999999998511067898998707721277778839753325899999
Q gi|254780705|r 271 FFKMPR-STAL--------VGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGST 341 (425)
Q Consensus 271 ~~~~~~-~~~l--------~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~i 341 (425)
T Consensus 141 ~~gl~~~~~wl~~~~~A~~~iii~~vW~~~~f~mli~lAgLq~Ip~~lyEAA~iDGA~~~q~f~~ItlP~l~p~i~~~~i 220 (295)
T COG1175 141 LLGLIPDINWLSDPNTALFAVIIVSVWKGTGFVMLLFLAGLQSIPKELYEAARIDGASPWQRFRKITLPLLRPVIFFVLI 220 (295)
T ss_pred HHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 80575556341390699999999999999849999999999569999999995899964365454104410279999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999876779999-98543210136656134455799999986036650069999999999999999999999999997
Q gi|254780705|r 342 VSLARALGETAPLL-FVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNR 420 (425)
Q Consensus 342 l~~~ra~GEta~ll-~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r 420 (425)
T Consensus 221 ~~~i~~~~~Fd~i~~lT~---------GGP~~~T~~l~~~~y~~af~~~--~~G~asA~avil~~i~~~~~~~~~~~~~~ 289 (295)
T COG1175 221 LRTIFAFQVFDLIYLLTG---------GGPGNATTTLAYYIYRTAFGGL--DFGYAAAIAVILFLIVLILTVVQLRLLRR 289 (295)
T ss_pred HHHHHHHHHHHHHHHHHC---------CCCCCHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999997369999807---------9996225599999999987006--66489999999999999999999999874
Q ss_pred HHCC
Q ss_conf 4104
Q gi|254780705|r 421 FKKR 424 (425)
Q Consensus 421 ~~~~ 424 (425)
T Consensus 290 ~~~~ 293 (295)
T COG1175 290 KERR 293 (295)
T ss_pred HHHC
T ss_conf 3531