HHsearch alignment for GI: 254780705 and conserved domain: COG4209

>COG4209 LplB ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].
Probab=99.23  E-value=5e-09  Score=76.31  Aligned_cols=207  Identities=18%  Similarity=0.126  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HC
Q ss_conf             66789999999999999999999999999864373024567898998876533699999999999986----------26
Q gi|254780705|r  204 GVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINF----------FK  273 (425)
Q Consensus       204 ~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~----------~~  273 (425)
T Consensus        78 f~i~rNTl~~s~~~li~gf~~pI~lAillnElr-~~~~kk~~QT~~y~PhFlSWVVv~~~v~~fls~d~GiiN~ll~~~g  156 (309)
T COG4209          78 FIILRNTLLYSVLFLILGFPVPIILAILLNELR-NKVFKKVVQTISYLPHFLSWVVVSGFVFAFLSIDGGIINQLLMSLG  156 (309)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHCCCCCHHHHHHHHCC
T ss_conf             999999999999999995379999999999998-7778888766333000210030565788763667518999999828


Q ss_pred             -C-------CCCHHHHHHHHHH-H-HHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -6-------6300468975334-5-4366899999999851106789899870772127777883975332589999999
Q gi|254780705|r  274 -M-------PRSTALVGGLILA-L-MTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVS  343 (425)
Q Consensus       274 -~-------~~~~~l~g~~~l~-~-m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~  343 (425)
T Consensus       157 ~~pi~fl~~~~wf~~--i~i~~~vWK~~G~~SIiylAai~~Idpt~YEAA~vDGA~rwqqiwhITlP~i~P~ivIllIL~  234 (309)
T COG4209         157 GDPINFLTNPDWFRP--IIIFSSVWKGAGWNSIIYLAAIAGIDPTLYEAAMVDGASRWQQIWHITLPAIRPLIVILLILN  234 (309)
T ss_pred             CCCEEHHCCCCCHHH--HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             983102158860267--887898884236788999999972799999999805488778888211032314999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999876779999985432101366561-3445579999998603665006999999999999999999999999999741
Q gi|254780705|r  344 LARALGETAPLLFVGMVAFVTDYPVGV-TDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFK  422 (425)
Q Consensus       344 ~~ra~GEta~ll~~~~~~~~~~~p~~~-~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~  422 (425)
T Consensus       235 iG~i~~~--------gFe~~yll~~~~~~~v~~vldtYVy~~gl--~~Gd~s~sTAaGlf~svVg~iLl~~aN~iakr~~  304 (309)
T COG4209         235 IGNIFNA--------GFELFYLLPNPSGYDVTEVLDTYVYRGGL--VTGDYSYSTAAGLFQSVVGFILLFLANRIAKRFD  304 (309)
T ss_pred             HHHHHHC--------CHHHEEEECCCCCCCHHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             5237653--------72560660576687489899999998101--3575118999999999999999999999999706


Q ss_pred             C
Q ss_conf             0
Q gi|254780705|r  423 K  423 (425)
Q Consensus       423 ~  423 (425)
T Consensus       305 ~  305 (309)
T COG4209         305 N  305 (309)
T ss_pred             C
T ss_conf             2