HHsearch alignment for GI: 254780705 and conserved domain: PRK09433
>PRK09433 thiP thiamine transporter membrane protein; Reviewed.
Probab=99.85 E-value=2.8e-18 Score=135.24 Aligned_cols=206 Identities=18% Similarity=0.055 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------H
Q ss_conf 1202667899999999999999999999999998643730245678989988765336999999999999---------8
Q gi|254780705|r 200 VAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLI---------N 270 (425)
Q Consensus 200 ~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~---------~ 270 (425)
T Consensus 49 d~~~~~~~~~t~~~a~~st~ls~~lg~~~A~~l~r~--~f~gr~~l~~l~~lp~~~P~~v~a~~~~~~~g~~G~l~~~l~ 126 (536)
T PRK09433 49 DSYLWHVVRFSFWQAFLSALLSVLLAIPLARALYRR--RFPGRGLLLRLCAMTLVLPVLVAVFGLLSVYGRSGWLASLLQ 126 (536)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 888999999999999999999999999999999955--873499999999999876999999999999821644999999
Q ss_pred HHCCCCC---HHHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6266630---046897-533454366899999999851106789899870772127777883975332589999999999
Q gi|254780705|r 271 FFKMPRS---TALVGG-LILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLAR 346 (425)
Q Consensus 271 ~~~~~~~---~~l~g~-~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~r 346 (425)
T Consensus 127 ~~g~~~~~~iyg~~gil~a~~~~~~P~~~~~~~~~l~~i~~~~~e~A~~LG~~~~~~f~~v~lP~~~pai~~~~~LVF~~ 206 (536)
T PRK09433 127 SLGLEWPFSIYGLQGILLAHVFFNLPLATRLLLQSLESIPSEQRQLAAQLGMRGWQFFRLVEWPWLRRQLPPVAALIFML 206 (536)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 82887786401299999999999999999999999981999999999875989868888634898878899999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87677999998543210136656134455799999986036650069999999999999999999999999997
Q gi|254780705|r 347 ALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNR 420 (425)
Q Consensus 347 a~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r 420 (425)
T Consensus 207 ~~~sF~~vl~LGGg------p~-----~~Tlev~IYq~~~~-~-~D~~~Aa~La~i~l~i~~~l~~l~~~~~~~ 267 (536)
T PRK09433 207 CFTSFATVLTLGGG------PK-----ATTIELAIYQALSF-D-FDLARAALLALLQLVLCLLLVLLSQRLSKA 267 (536)
T ss_pred HHHHHHHHHHHCCC------CC-----CHHHHHHHHHHHHH-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99988899995588------64-----03689999999986-4-799999999999999999999999998224