HHsearch alignment for GI: 254780705 and conserved domain: PRK09471
>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.35 E-value=7.2e-09 Score=75.30 Aligned_cols=207 Identities=13% Similarity=0.047 Sum_probs=149.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
Q ss_conf 10120266789999999999999999999999999864373024567898998876533699999999999986266---
Q gi|254780705|r 198 PEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKM--- 274 (425)
Q Consensus 198 ~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~--- 274 (425)
T Consensus 85 ~V~~~i~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~-~~~~~D~~~~~~~~~~~siP~F~la~lli~iF~~~l~~~P~ 163 (306)
T PRK09471 85 SVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALK-QNTKWDYTVMGFAMTGVVIPSFVVAPLLVMIFAIILHWLPG 163 (306)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88999998889999999999999999999999999983-47516199999999999989999999998899972176377
Q ss_pred CCC---H---HHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 630---0---468975334543668999999998-511067898998707721277778839753325899999999998
Q gi|254780705|r 275 PRS---T---ALVGGLILALMTLPSIIIATGVAL-RTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARA 347 (425)
Q Consensus 275 ~~~---~---~l~g~~~l~~m~lP~i~~~~~~al-~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra 347 (425)
T Consensus 164 ~g~~~~~~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~P~it~~~~~~~~l 243 (306)
T PRK09471 164 GGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGI 243 (306)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88875207887536999999999999999999999998779999999869984007300129842999999999999998
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 767799999854321013665613445579999998603665006999999999999999999999999999741
Q gi|254780705|r 348 LGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFK 422 (425)
Q Consensus 348 ~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~ 422 (425)
T Consensus 244 l~GsvivE~------iF~~PG--------iG~l~~~Ai~~~---D~p~v~g~~l~~a~~~i~~nll~Dil~~~lD 301 (306)
T PRK09471 244 ITGSMVIET------IFGLPG--------IGQLFVNGALNR---DYSLVLSLTILVGALTILFNAIVDVLYAVID 301 (306)
T ss_pred HCCHHHHHH------HHCCCC--------HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 458712109------864767--------599999999804---9899999999999999999999999999729