HHsearch alignment for GI: 254780705 and conserved domain: PRK09471

>PRK09471 oppB oligopeptide transporter permease; Reviewed.
Probab=99.35  E-value=7.2e-09  Score=75.30  Aligned_cols=207  Identities=13%  Similarity=0.047  Sum_probs=149.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
Q ss_conf             10120266789999999999999999999999999864373024567898998876533699999999999986266---
Q gi|254780705|r  198 PEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKM---  274 (425)
Q Consensus       198 ~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~---  274 (425)
T Consensus        85 ~V~~~i~~~lp~Tl~L~~~a~~i~~~lgi~lGi~aa~~-~~~~~D~~~~~~~~~~~siP~F~la~lli~iF~~~l~~~P~  163 (306)
T PRK09471         85 SVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAALK-QNTKWDYTVMGFAMTGVVIPSFVVAPLLVMIFAIILHWLPG  163 (306)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             88999998889999999999999999999999999983-47516199999999999989999999998899972176377


Q ss_pred             CCC---H---HHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             630---0---468975334543668999999998-511067898998707721277778839753325899999999998
Q gi|254780705|r  275 PRS---T---ALVGGLILALMTLPSIIIATGVAL-RTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARA  347 (425)
Q Consensus       275 ~~~---~---~l~g~~~l~~m~lP~i~~~~~~al-~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra  347 (425)
T Consensus       164 ~g~~~~~~~~liLP~~~l~l~~~~~~~r~~R~~~~~~l~~dyV~~ArakGl~~~~i~~rh~lrnal~P~it~~~~~~~~l  243 (306)
T PRK09471        164 GGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAFVGI  243 (306)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88875207887536999999999999999999999998779999999869984007300129842999999999999998


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             767799999854321013665613445579999998603665006999999999999999999999999999741
Q gi|254780705|r  348 LGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFK  422 (425)
Q Consensus       348 ~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~  422 (425)
T Consensus       244 l~GsvivE~------iF~~PG--------iG~l~~~Ai~~~---D~p~v~g~~l~~a~~~i~~nll~Dil~~~lD  301 (306)
T PRK09471        244 ITGSMVIET------IFGLPG--------IGQLFVNGALNR---DYSLVLSLTILVGALTILFNAIVDVLYAVID  301 (306)
T ss_pred             HCCHHHHHH------HHCCCC--------HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             458712109------864767--------599999999804---9899999999999999999999999999729