HHsearch alignment for GI: 254780705 and conserved domain: PRK10352

>PRK10352 nickel transporter permease NikB; Provisional.
Probab=99.42  E-value=5e-10  Score=82.64  Aligned_cols=217  Identities=14%  Similarity=0.066  Sum_probs=159.4

Q ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             23213443211012026678999999999999999999999999986437302456789899887653369999999999
Q gi|254780705|r  188 GFFINGASSRPEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAV  267 (425)
Q Consensus       188 ~f~t~~~s~~~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~  267 (425)
T Consensus        79 D~G~S~~~~~pV~~~I~~~lp~Tl~L~~~a~~l~~~igi~lGi~aa~~-~~~~~D~~~~~~~~~~~siP~F~la~lli~~  157 (314)
T PRK10352         79 DFGISFATQRPVLDDMLNFLPATLELAGAALVLILLTSVPLGIWAARH-RDRLPDFAVRFIAFLGVSMPNFWLAFLLVMA  157 (314)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             578766368860898887637889999999999999985999998720-7972101310589987873199999999999


Q ss_pred             HHHHHCCC---CC----HHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99862666---30----0468975334543668999999998-5110678989987077212777788397533258999
Q gi|254780705|r  268 LINFFKMP---RS----TALVGGLILALMTLPSIIIATGVAL-RTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTG  339 (425)
Q Consensus       268 ~~~~~~~~---~~----~~l~g~~~l~~m~lP~i~~~~~~al-~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g  339 (425)
T Consensus       158 fa~~l~~~P~~g~~~~~~liLP~l~l~l~~~a~~~r~~R~~~~e~l~~dyv~~ArakGls~~~i~~rh~lrnal~P~it~  237 (314)
T PRK10352        158 FSVYLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLSDRQVERRHILRNASLPMITA  237 (314)
T ss_pred             HHHHCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHH
T ss_conf             99964767876778336541119999999999999999999999863299999998698931360865287429889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999998767799999854321013665613445579999998603665006999999999999999999999999999
Q gi|254780705|r  340 STVSLARALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRN  419 (425)
Q Consensus       340 ~il~~~ra~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~  419 (425)
T Consensus       238 ~~~~~~~ll~GavivE~------iF~~pG--------lG~ll~~Ai~~r---D~p~v~g~~l~~~~~~v~~nli~Dily~  300 (314)
T PRK10352        238 VGMHIGELIGGTMIIEN------IFAWPG--------VGRYAVSAIFNR---DYPVIQCFTLMMVVVFVVCNLIVDLLNA  300 (314)
T ss_pred             HHHHHHHHHCCHHHEEH------HHCCCC--------HHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999998477610018------754767--------599999999813---8899999999999999999999999999


Q ss_pred             HHH
Q ss_conf             741
Q gi|254780705|r  420 RFK  422 (425)
Q Consensus       420 r~~  422 (425)
T Consensus       301 ~lD  303 (314)
T PRK10352        301 ALD  303 (314)
T ss_pred             HCC
T ss_conf             648