HHsearch alignment for GI: 254780705 and conserved domain: PRK10561
>PRK10561 glycerol-3-phosphate transporter permease; Provisional.
Probab=99.73 E-value=3.8e-15 Score=115.30 Aligned_cols=200 Identities=16% Similarity=0.095 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------H
Q ss_conf 026678999999999999999999999999986437302456789899887653369999999999998----------6
Q gi|254780705|r 202 GIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLIN----------F 271 (425)
Q Consensus 202 Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~----------~ 271 (425)
T Consensus 52 ~f~~~~~ntl~~~~~~~~~~~~l~l~lA~ll~~~-~--~~~~~~r~~~~lP~~i~~vv~~~~w~~l~~~~~G~~n~~l~~ 128 (280)
T PRK10561 52 YYLDSFWTTIKFSALVTVSGLLVSLFFAALVDYV-V--RGSRFYQTLMLLPYAVAPAVAAVLWIFLFNPGRGLITHFLAE 128 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-C--CHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 7999999999999999999999999999998610-2--078999999998755319999999999969871089999986
Q ss_pred HCCCCC---H---HHHHH-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 266630---0---46897-5334543668999999998511067898998707721277778839753325899999999
Q gi|254780705|r 272 FKMPRS---T---ALVGG-LILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSL 344 (425)
Q Consensus 272 ~~~~~~---~---~l~g~-~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~ 344 (425)
T Consensus 129 ~g~~~~~~~~~~~a~~~vi~~~vW~~~g~~~li~lagL~~Ip~~l~EAA~iDGA~~~q~f~~ItlPll~p~~~~~~i~~~ 208 (280)
T PRK10561 129 FGYDWNHAQNSGQAMFLVVFASVWKQISYNFLFFYAALQSIPRSLVEAAAIDGAGPIRRFFKLALPLIAPVSFFLLVVNL 208 (280)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHHHH
T ss_conf 57777544674899999999999999899999999998579977999999769977523312304610599999999999
Q ss_pred HHH-HHHHHHH-HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998-7677999-9985432101366561344557999999860366500699999999999999999999999
Q gi|254780705|r 345 ARA-LGETAPL-LFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAML 415 (425)
Q Consensus 345 ~ra-~GEta~l-l~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~ 415 (425)
T Consensus 209 i~~~~~~f~~i~~~t~---------GGP~~~t~~l~~~iy~~~f~~~--~~g~asA~svil~~i~~~~~~i~~ 270 (280)
T PRK10561 209 VYAFFDTFPVIDAATS---------GGPVQATTTLIYKIYREGFTGL--DLSSSAAQSVVLMFLVIVLTVVQF 270 (280)
T ss_pred HHHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999965688864368---------8885288999999999998759--961999999999999999999999