HHsearch alignment for GI: 254780705 and conserved domain: PRK10914
>PRK10914 dipeptide transporter permease DppB; Provisional.
Probab=99.42 E-value=2.4e-09 Score=78.38 Aligned_cols=217 Identities=13% Similarity=0.130 Sum_probs=152.7
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 23213443211012026678999999999999999999999999986437302456789899887653369999999999
Q gi|254780705|r 188 GFFINGASSRPEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAV 267 (425)
Q Consensus 188 ~f~t~~~s~~~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~ 267 (425)
T Consensus 77 d~G~S~~~~~pV~~~i~~~lp~Tl~L~~~a~il~~~igi~lGi~aa~~-~~~~~D~~~~~~~~~~~siP~F~lallli~i 155 (339)
T PRK10914 77 DLGISLKSRIPVWEEFVPRFKATLELGVCAMIFATAVGIPVGVLAAVK-RGSIFDHTAVGLALTGYSMPIFWWGMMLIML 155 (339)
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 888734268836999987272589999999999999999999999985-2751113678889861230699999999999
Q ss_pred HHHHHCCC---C----------CH-------------------------HHHHHHHHHHHHHHHHHHHHHHHH-HHCHHH
Q ss_conf 99862666---3----------00-------------------------468975334543668999999998-511067
Q gi|254780705|r 268 LINFFKMP---R----------ST-------------------------ALVGGLILALMTLPSIIIATGVAL-RTVPSS 308 (425)
Q Consensus 268 ~~~~~~~~---~----------~~-------------------------~l~g~~~l~~m~lP~i~~~~~~al-~~vp~~ 308 (425)
T Consensus 156 f~~~l~~~P~~G~~~~~~~~~~~~p~~g~~~~~~~~~g~~~~~~~~l~hliLP~l~L~l~~~a~~~r~~R~~~~~~l~~d 235 (339)
T PRK10914 156 VSVHWNLTPVSGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLAVIVRMTRSSMLEVLGED 235 (339)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99995747776767653124666665541001114204511378899999999999999999999999999999998349
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 89899870772127777883975332589999999999876779999985432101366561344557999999860366
Q gi|254780705|r 309 IRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADA 388 (425)
Q Consensus 309 ~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~ 388 (425)
T Consensus 236 yV~~ArakGl~~~~i~~~h~lrnal~P~it~~g~~~~~ll~GsvivE~v------F~~pG--------iG~l~~~Ai~~r 301 (339)
T PRK10914 236 YIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETI------FSWPG--------LGRWLIDALQRR 301 (339)
T ss_pred HHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HCCCC--------HHHHHHHHHHHC
T ss_conf 9999998594933140498398609989999999999999769998698------67757--------699999999835
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5006999999999999999999999999999741
Q gi|254780705|r 389 ERPFVERTFGAILLLLIFLAVINTAMLWLRNRFK 422 (425)
Q Consensus 389 ~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~ 422 (425)
T Consensus 302 ---D~pvi~g~~l~~~~~~i~~nli~Dil~~~lD 332 (339)
T PRK10914 302 ---DYPVVQGGVLLVATMIILVNLLVDLLYGVVN 332 (339)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ---8899999999999999999999999998628