HHsearch alignment for GI: 254780705 and conserved domain: PRK10952
>PRK10952 glycine betaine transporter membrane protein; Provisional.
Probab=99.82 E-value=4.5e-18 Score=133.92 Aligned_cols=200 Identities=21% Similarity=0.322 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 12026678999999999999999999999999986437302456789899887653369999999999998626663004
Q gi|254780705|r 200 VAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTA 279 (425)
Q Consensus 200 ~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~~~~~~~~~ 279 (425)
T Consensus 138 ~~G~W~~aM~TLalvlvav~~~~iiGiplGI~~ar---s~r~~~il~PiLD~mQT~P~FVYLi----P~vmlFGi---G~ 207 (354)
T PRK10952 138 AIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLAR---SPRAAKIIRPLLDAMQTTPAFVYLV----PIVMLFGI---GN 207 (354)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHCCHHHHHHH----HHHHHHCC---CC
T ss_conf 96632999999999999999999999999999974---6999999999998731130799999----99999279---71
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68975334543668999999998511067898998707721277778839753325899999999998767799999854
Q gi|254780705|r 280 LVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVGM 359 (425)
Q Consensus 280 l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ll~~~~ 359 (425)
T Consensus 208 vpaviAtviyAlpP~iR~T~lGir~Vp~~viEAa~~~G~T~~Q~L~kVeLPlA~P~ImaGvNQtimlaLsMvVIAa~IGa 287 (354)
T PRK10952 208 VPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAV 287 (354)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 45999999997358999999999608888999999849998889898336024999999999999999999999999578
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCC
Q ss_conf 3210136656134455799999986036650069999999999999999999--99999999741049
Q gi|254780705|r 360 VAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVIN--TAMLWLRNRFKKRW 425 (425)
Q Consensus 360 ~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n--~~a~~lr~r~~~~w 425 (425)
T Consensus 288 gG---------------LG~~Vl~gi~~~d~G-~gl~aGl~IVlLAIiLDRiTqa~g~~~r~~~~~~w 339 (354)
T PRK10952 288 GG---------------LGQMVLRGIGRLDMG-LATVGGVGIVILAIILDRLTQAVGRDSRSRGNRRW 339 (354)
T ss_pred CC---------------CHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf 86---------------618999998622436-89999999999999999988985620002688610