HHsearch alignment for GI: 254780705 and conserved domain: PRK11122
>PRK11122 artM arginine transporter permease subunit ArtM; Provisional.
Probab=99.62 E-value=2.1e-12 Score=97.83 Aligned_cols=155 Identities=19% Similarity=0.156 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-----H-C
Q ss_conf 2667899999999999999999999999998643730245678989988765336999999999---99986-----2-6
Q gi|254780705|r 203 IGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSA---VLINF-----F-K 273 (425)
Q Consensus 203 i~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~---~~~~~-----~-~ 273 (425)
T Consensus 8 ll~G~~~Tl~l~~~s~~~~~~lG~~la~~r--~~~~~~l~~~~~~yv~~~Rg~PlLv~lf~~yfg~~~~~~l~~~~~~~~ 85 (222)
T PRK11122 8 LLKGLHTSLTLTVASLLVALVLALIFTIIL--TLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPWLQEYPWLWH 85 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 999999999999999999999999999999--879778999999999999564699999999981488877750303532
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66300468975334543668999999998511067898998707721277778839753325899999999998767799
Q gi|254780705|r 274 MPRSTALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAP 353 (425)
Q Consensus 274 ~~~~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta~ 353 (425)
T Consensus 86 ~~~~~~~~~viaL~l~~~Ay~aEi~R~gi~sV~~GQ~EAA~slGls~~q~~-rIilPQa~r~~lP~l~n~~i~liK~TsL 164 (222)
T PRK11122 86 LLSQPWLCAMLALALNSAAYSTQLFYGAIRAIPEGQWQSCSALGMSKKQTL-AILLPYAFKRALSSYSNEVVLVFKGTSL 164 (222)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 022599999999999999999999999996099879999998698999999-9899999999866889999999998499
Q ss_pred HHHHHHH
Q ss_conf 9998543
Q gi|254780705|r 354 LLFVGMV 360 (425)
Q Consensus 354 ll~~~~~ 360 (425)
T Consensus 165 ~s~Igv~ 171 (222)
T PRK11122 165 AYTITLM 171 (222)
T ss_pred HHHHHHH
T ss_conf 9999899