HHsearch alignment for GI: 254780705 and conserved domain: PRK11602
>PRK11602 cysW sulfate/thiosulfate transporter permease subunit; Provisional.
Probab=99.96 E-value=1.5e-26 Score=187.90 Aligned_cols=209 Identities=21% Similarity=0.166 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HH
Q ss_conf 026678999999999999999999999999986437302456789899887653369999999999998---------62
Q gi|254780705|r 202 GIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLIN---------FF 272 (425)
Q Consensus 202 Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~---------~~ 272 (425)
T Consensus 61 ~~~~al~~Tl~~a~~~~~i~lvlG~~lA~~l~r~~--f~gr~~~~~l~~lP~~ip~vV~g~~~~~l~~~~G~l~~~L~~~ 138 (291)
T PRK11602 61 DMLHAIWLTVLIALIAVPVNLVFGILLAWLVTRFN--FPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEH 138 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf 89999999999999999999999999999999278--8608999999999886379999999999826443789999855
Q ss_pred CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6663-004689753345436689999999985110678989987077212777788397533258999999999987677
Q gi|254780705|r 273 KMPR-STALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGET 351 (425)
Q Consensus 273 ~~~~-~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEt 351 (425)
T Consensus 139 ~~~~~~s~~giil~~v~~~~Pf~~~~~~a~l~~i~~~l~EAA~~lGAs~wq~F~~VtLPll~P~i~~g~iL~f~~al~~F 218 (291)
T PRK11602 139 NLQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF 218 (291)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 83286778999999999999999999999998689589999987699987898986498309999999999999998756
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999985432101366561344557999999860366500699999999999999999999999999974104
Q gi|254780705|r 352 APLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR 424 (425)
Q Consensus 352 a~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~ 424 (425)
T Consensus 219 g~v~~l~G~---------~~g~T~t~~~~i~~~~~~~~~~---~a~~~a~~l~~~~~i~l~l~~~lq~R~~r~ 279 (291)
T PRK11602 219 GAVSVVSGS---------IRGETLSLPLQIELLEQDYNTV---GSFTAAALLTLMAIITLFLKSMLQWRLENQ 279 (291)
T ss_pred CCHHEEECC---------CCCCCCHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 804311579---------9885010699999999812644---699999999999999999999999999707