>TIGR00969 3a0106s02 sulfate ABC transporter, permease protein; InterPro: IPR005667 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices, This entry describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulphate ABC transporter; GO: 0015563 uptake transmembrane transporter activity, 0006810 transport, 0016020 membrane.

Probab=99.95 E-value=1.5e-28 Score=200.77 Aligned_cols=204 Identities=24% Similarity=0.251 Sum_probs=163.5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHC Q ss_conf 266789999999999999999999999999864373024567898998876533699999999---------99998626 Q gi|254780705|r 203 IGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGS---------AVLINFFK 273 (425) Q Consensus 203 i~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl---------~~~~~~~~ 273 (425) T Consensus 67 ~~~A~~lT~~~aliav~lN~vFG~~~AWvLtR~~FPG--r~lLda~~DLPFAlspvVAGL~l~llYg~~Gw~G~~~~~fg 144 (280) T TIGR00969 67 AVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQFPG--RKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFG 144 (280) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCHHHHCC T ss_conf 9999999999999999999999999999997126982--58999986213342506753300045357785113230178 Q ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 663-0046897533454366899999999851106789899870772127777883975332589999999999876779 Q gi|254780705|r 274 MPR-STALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETA 352 (425) Q Consensus 274 ~~~-~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEta 352 (425) T Consensus 145 iqI~F~~~G~~lAmiFvs~PFVvRev~PVL~Elg~e~EEAA~tLGA~~WQtFwRV~LP~i~w~llyGv~Lt~aRAlGEFG 224 (280) T TIGR00969 145 IQIIFTWPGVALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFG 224 (280) T ss_pred CEEEEECCCEEEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCE T ss_conf 68998412146665342168045431001341385578999862899830267876688726788867876556543011 Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 99998543210136656134455799999986036650069999999999999999999999999997 Q gi|254780705|r 353 PLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNR 420 (425) Q Consensus 353 ~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r 420 (425) T Consensus 225 aV~~vSgn---------i~gkt~~lplli~~~l---~~Yd~~gA~~ia~vL~l~slv~L~~~~~Lq~R 280 (280) T TIGR00969 225 AVVVVSGN---------IPGKTLTLPLLIFERL---EQYDYPGAYVIAAVLLLVSLVTLFLINLLQAR 280 (280) T ss_pred EEEEEECC---------CCCCCCCHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC T ss_conf 07899446---------8863120156644476---60360789999999999999999999985039

HHsearch alignment for GI: 254780705 and conserved domain: TIGR00969