HHsearch alignment for GI: 254780705 and conserved domain: TIGR03226

>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.93  E-value=4.6e-24  Score=172.10  Aligned_cols=209  Identities=18%  Similarity=0.124  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Q ss_conf             12026678999999999999999999999999986437302456789899887653369999999999998---------
Q gi|254780705|r  200 VAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSHKGFFSSFVQANINNLASVPSIVYGILGSAVLIN---------  270 (425)
Q Consensus       200 ~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~---------  270 (425)
T Consensus        87 ~~~~~~al~nTl~~a~~~t~~~lvlG~~lA~~L~r~~--f~g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~~G~ln~~L~  164 (312)
T TIGR03226        87 SHDFRDALGNTLQIAFAAAAGALLLGSALAAILFFIP--FPGAELIGRFLDLFIAFPSFLIAFAFIFIYGSAGLLNGALM  164 (312)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf             9679999999999999999999999999999999623--76289999999999998899999999999835770779999


Q ss_pred             -HHCCCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -626663------0046897533454366899999999851106789899870772127777883975332589999999
Q gi|254780705|r  271 -FFKMPR------STALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVS  343 (425)
Q Consensus       271 -~~~~~~------~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~  343 (425)
T Consensus       165 ~l~gl~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL~  244 (312)
T TIGR03226       165 RAFAFDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGILC  244 (312)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             96286677457774099999999999899999999999996897899999884999888678742784689999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99987677999998543210136656134455799999986036650069999999999999999999999999997410
Q gi|254780705|r  344 LARALGETAPLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKK  423 (425)
Q Consensus       344 ~~ra~GEta~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~  423 (425)
T Consensus       245 Fi~~~~~F~~~~~lgg~~------------~~tl~~~Iy~~~~~~--~d~~~AaAlavillv~~l~l~~l~r~~~rR~~~  310 (312)
T TIGR03226       245 FLLTLNEFGILLFIGAAG------------LITLPMAIYSKAILD--IDLPAAAAGALIMIALSLALFALYRLAARRAGE  310 (312)
T ss_pred             HHHHHHHHCCEEEEECCC------------CEEHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             999997754113440899------------701799999999875--798999999999999999999999999876348


Q ss_pred             C
Q ss_conf             4
Q gi|254780705|r  424 R  424 (425)
Q Consensus       424 ~  424 (425)
T Consensus       311 ~  311 (312)
T TIGR03226       311 G  311 (312)
T ss_pred             C
T ss_conf             9