HHsearch alignment for GI: 254780705 and conserved domain: pfam11812
>pfam11812 DUF3333 Domain of unknown function (DUF3333). This family of proteins are functionally uncharacterized. This family is only found in bacteria. This presumed domain is typically between 116 to 159 amino acids in length.
Probab=100.00 E-value=0 Score=321.05 Aligned_cols=152 Identities=38% Similarity=0.570 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECHHHHCCCCCCCCCHHHHHCCCHH
Q ss_conf 99888888865689999999999999999999999976144462168999998730888906576566798886304589
Q gi|254780705|r 7 NKKNLKYRYISEWLFRFYCVVAVLVVFVFLILLLSSIVSKGIGALWQTHISLPIEFSETIVDPQKKRFMDPAILLRADYN 86 (425)
Q Consensus 7 ~~~~LkkR~~aEkrFr~yGi~AI~ial~fL~~Ll~sI~s~G~~AF~qT~I~l~V~~d~~~id~~~~~~~d~~~l~~~~~~ 86 (425)
T Consensus 1 v~~~LkkR~~aE~RFr~yG~~AI~~al~fL~iLl~sI~s~G~~AF~qT~I~l~V~~d~~~id~~~~~--~~~~l~~a~~~ 78 (155)
T pfam11812 1 VDARLKKRYAAERRFRAYGLAAILIGLAFLVILLGSIVSNGYGAFQQTEITLEVTLDEEVLDPDGNR--DPKKLSTANYR 78 (155)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHCCCCCCC--CHHHHHHCCHH
T ss_conf 9347888999999999998999999999999999999985499887258888888289991988999--99999856599
Q ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCEEEEEEEECCCCHHHHCCCCCC--CCH
Q ss_conf 99999999631456666034898998730016899999974063215974789997045302330345565--300
Q gi|254780705|r 87 LLVRKALARKLSISDSNHALLRQASQMLSTTARYHLRKTLMTDPSLIGKTVEVSLLASANIDSALKGYLYS--PAN 160 (425)
Q Consensus 87 ~li~~aL~~~~p~~~~~r~~kr~l~~liS~~a~~~Lrd~v~~np~liG~t~~~~llAsddvD~~~KG~i~r--~e~ 160 (425)
T Consensus 79 ~~v~~al~~~fp~~~~~~~~~~~l~~liS~~a~~~lr~~v~~nP~lig~t~~~~~~asddvD~~~KG~i~r~~pe~ 154 (155)
T pfam11812 79 PLIKDALEELLPEVGDRSDLRSDLYSLISEGAAAQLRDFVLANPELIGTTVTFWLLASSDVDGYLKGRVDRESAAL 154 (155)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHCCCEEEEEEEECCHHHHHHCCCCCCCCCCC
T ss_conf 9999999986765332368899999981553899999999959897398599998834145899838989889887