HHsearch results for GI: 254780705 and protein with PDBid: 3dhw_A
>3dhw_A D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12} SCOP: f.58.1.1
Probab=99.91 E-value=2e-23 Score=166.68 Aligned_cols=210 Identities=19% Similarity=0.174 Sum_probs=163.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11012026678999999999999999999999999986437-----3024567898998876533699999999999986
Q gi|254780705|r 197 RPEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFSH-----KGFFSSFVQANINNLASVPSIVYGILGSAVLINF 271 (425)
Q Consensus 197 ~~e~~Gi~~ai~gTl~~~~ia~~ia~pigv~~aiyl~e~a~-----~~~~~~~i~~~i~~la~vPSIv~Gl~gl~~~~~~ 271 (425)
+|....++.++..|+..++++.+++..+|+..|+++..+.+ ..++.+++...++.+.++|.+++.+++..++...
T Consensus 3 ~~~~~l~l~~~~~Tl~~a~~~~~~~~~ig~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 82 (217)
T 3dhw_A 3 EPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVI 82 (217)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTCSSSCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999999999999999999999999999999999864443200899999999999999999999999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 26663004689753345436689999999985110678989987077212777788397533258999999999987677
Q gi|254780705|r 272 FKMPRSTALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGET 351 (425)
Q Consensus 272 ~~~~~~~~l~g~~~l~~m~lP~i~~~~~~al~~vp~~~~eaa~~LGas~~~~~~~v~lp~a~pgi~~g~il~~~ra~GEt 351 (425)
++. ..+...+.+++++...|++....+++++++|++++|||.++|+|+||+++||++|.++|++++|..+++..+++|+
T Consensus 83 ~~~-~~~~~~~ii~~~~~~~~~~~~~~~~~l~~i~~~~~eAA~~lGas~~q~f~~vilP~~~p~ii~~~~~~~~~~i~~~ 161 (217)
T 3dhw_A 83 VGT-SIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYS 161 (217)
T ss_dssp TCC-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTTTHHHHHTCCTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 861-2369999999999867999999999998589899999871898989996974199789999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999985432101366561344557999999860366500699999999999999999999999999974104
Q gi|254780705|r 352 APLLFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR 424 (425)
Q Consensus 352 a~ll~~~~~~~~~~~p~~~~~p~~tlp~~Iy~~~~~~~~~~~~~~~aa~lvLl~~~~~~n~~a~~lr~r~~~~ 424 (425)
....++|+.. +....+.......+. +...+..+.+.++++.++....+++||++||
T Consensus 162 ~i~~~ig~~~---------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~rR 217 (217)
T 3dhw_A 162 AMGGAVGAGG---------------LGQIGYQYGYIGYNA--TVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217 (217)
T ss_dssp HHCCSTTCCH---------------HHHHHHHHHHSSCCT--THHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHH---------------HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999998879---------------999999999986008--9999999999999999999999999975699