RPSBLAST alignment for GI: 254780705 and conserved domain: COG1177
>gnl|CDD|31370 COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism]. Length = 267
Score = 60.6 bits (147), Expect = 8e-10
Identities = 59/250 (23%), Positives = 99/250 (39%), Gaps = 24/250 (9%)
Query: 177 SDGALFLDFNYGFFINGASSRPEVAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYLEEFS 236
+ L L F GF + + + A+ SL + L+ L+ LG +A+ L +
Sbjct: 37 NSSRLGLVFPPGFSLKWYGALFSDPRLLSALWNSLLIALLSALLATLLGTLAALALARY- 95
Query: 237 HKGFFSSFVQANINNLASVPSIVYGILGSAVLINFFKMPRSTALVGGLILA--LMTLPSI 294
+ + ++ I VP IV GI +L +P ++LA + LP +
Sbjct: 96 -RFRGKNLLEGLILLPLVVPDIVTGI-ALLLLFAALGLPGGF---WTIVLAHIVFALPFV 150
Query: 295 IIATGVALRTVPSSIRSAALGLGASKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPL 354
++ L+ S+ AA LGAS QT LPL +P IL+G+ ++ + E
Sbjct: 151 VVVVSARLQGFDRSLEEAARDLGASPWQTFRRVTLPLILPGILSGALLAFTLSFDEFVIT 210
Query: 355 LFVGMVAFVTDYPVGVTDIATAFPVQIYLWAADAERPFVERTFGAILLLLIFLAVINTAM 414
F+ F T P+QIY P A+ LL+ L+++ +
Sbjct: 211 FFLAGPGFTT------------LPLQIYSMIRRGITP----EINALSTLLLLLSLLLILL 254
Query: 415 LWLRNRFKKR 424
R + R
Sbjct: 255 ASRLLRRRAR 264