RPSBLAST alignment of GI: 254780705 and protein with PDBid: 3dhw
>3dhw_A D-methionine transport system permease protein METI; ABC-transporter, methionine uptake transporter, membrane protein, amino-acid transport; 3.70A {Escherichia coli K12} SCOP: f.58.1.1 Length = 217
Score = 53.2 bits (127), Expect = 1e-07
Identities = 39/226 (17%), Positives = 79/226 (34%), Gaps = 19/226 (8%)
Query: 200 VAGIGVAVVGSLYMMLIVIGLSFPLGIASAIYL-EEFSHKGFFSSFVQANINNLASVPSI 258
V G+ + + + P+G+ + + V A +N S+P I
Sbjct: 10 VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFI 69
Query: 259 VYGILGSAVLINFFKMPRSTALVGGLILALMTLPSIIIATGVALRTVPSSIRSAALGLGA 318
+ + + L + P I AL +P+ + A+ +GA
Sbjct: 70 ILLVWMIPFTRVIVGTSIG-LQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGA 128
Query: 319 SKVQTVFHHVLPLAMPAILTGSTVSLARALGETAPLLFVGMVAFVTDYPVGVTDIATAFP 378
+ +Q V +LP A+P ++ +T++L +G +A VG G+ I +
Sbjct: 129 TPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGA--------GGLGQIGYQYG 180
Query: 379 VQIYLWAADAERPFVERTFGAILLLLIFLAVINTAMLWLRNRFKKR 424
Y ++LL+I + +I A + ++
Sbjct: 181 YIGYNATV---------MNTVLVLLVILVYLIQFAGDRIVRAVTRK 217