HHsearch alignment for GI: 254780707 and conserved domain: COG1840
>COG1840 AfuA ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism].
Probab=97.57 E-value=0.0023 Score=37.45 Aligned_cols=234 Identities=15% Similarity=0.159 Sum_probs=102.8
Q ss_pred HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC-CCCCEEECCCCCCHHHHHH--------------HHHCCCCCCEE
Q ss_conf 99999987798079998157620578988521013-3530121332024767876--------------76248787246
Q gi|254780707|r 43 IAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGD-DTIDIVNSSRKITQNELDE--------------CKKHGVSDIQE 107 (346)
Q Consensus 43 ~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~-~~~dig~ssr~l~~~E~~~--------------~~~~~~~~~~~ 107 (346)
T Consensus 1 ~~~~f~~~-~gikv~-~~~~~s~~~~~~~~~e~~~~~~aDv~~~~~~~~~~~l~~~gll~~y~~~~~~~i~~~~~~~~~~ 78 (299)
T COG1840 1 LIKAFEKK-PGIKVE-FVDAGSGELLARIIAEKGNPQAADVLWGGAPVSLDQLKEAGLLQPYKSPELDEIPAWAPDPDGA 78 (299)
T ss_pred CHHHHHHC-CCCEEE-EEECCCHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf 95567337-796689-8748848999999972248998818960681699999857972226983465653313464446
Q ss_pred EEE-ECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCE-EECCCCCCCHHHHHHHH
Q ss_conf 665-2154125541666545688888887641025555532367302323100111224503-54488542357899988
Q gi|254780707|r 108 VTI-GHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIA-IYVPSGKHGTREVLEKK 185 (346)
Q Consensus 108 ~~v-~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~-~~~r~~~SGT~~~F~~~ 185 (346)
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~~~~--------------------~~P~~w~DL~~--p~~kg~i~~~~p~~s~~--~~~~~ 134 (299)
T COG1840 79 YGGGYVGPLVFAVNTDYNKDLLK--------------------PVPKSWADLAK--PEYKGKVQMADPTSSGT--AYAAL 134 (299)
T ss_pred CCCCEEEEEEEEEEEECCCCCCC--------------------CCCCCHHHHHC--HHHCCCEEEECCCCCHH--HHHHH
T ss_conf 65644778999996110344568--------------------99867998709--88669846547885589--99999
Q ss_pred HCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
Q ss_conf 51345556541011111013660001344431024664021166236777631015321001332001100111001344
Q gi|254780707|r 186 VLQEGCVRSRNFSKMRDMFKYNVQQLSVACTSVRQDGIAIEVDGDYTETLARIEVNKDVFGFVGLSFYKNNADVLKLVPI 265 (346)
Q Consensus 186 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~igy~~~~~~~~~~~~~~~~~~ 265 (346)
T Consensus 135 ~~~---~~~G~~~~~~~l~~l~~n~--~----------~-~~~~~~~~~~~~va~Ge~~vg~~~~~~~~~~~~~~~~~~v 198 (299)
T COG1840 135 LAL---QAYGEEKGWAYLKGLAANL--A----------T-YTGGSSSVVAKVVAGGEAAVGLGNLYYGAYAKDKAKGAPV 198 (299)
T ss_pred HHH---HHCCHHHHHHHHHHHHHHC--C----------C-CCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCE
T ss_conf 999---8648799999999999851--3----------3-4578828899997479864788721079999751469856
Q ss_pred CCCCCCHHHHCCCCCCCEEEEEE-EEECCCCCCCHHHHHHHHHHHCHHHCCCCCHHHHCCCC-CCCH
Q ss_conf 57678955602798750367899-97078856688999999997498740522027755963-4899
Q gi|254780707|r 266 DGIVPSMGTIVSGLYPISRPLLF-YVKRQHFNSVLGLREYVSFSVSDEMMAPDSQLFQYGLI-PISN 330 (346)
Q Consensus 266 ~~v~p~~~~i~~g~YPl~r~ly~-yv~~~~~~~~~~~~~Fl~~~ls~~~~~~~~~~~~~Gyv-PLp~ 330 (346)
T Consensus 199 ~iv~P~~-----G-~~v~-~~~vaiik~a~--~~e~Ak~fid~llS~egQ~---~~~~~~~~~~~~~ 253 (299)
T COG1840 199 EVVYPEE-----G-TGVN-PSGVALLKKAK--NPEAAKLFIDFLLSKEGQE---ILAKKGYSPEIPV 253 (299)
T ss_pred EEEECCC-----C-CEEE-EEEEEEECCCC--CHHHHHHHHHHHCCHHHHH---HHHHCCCCCCCCC
T ss_conf 9994898-----8-6897-54355434899--9899999999980898899---9984175766788