HHsearch alignment for GI: 254780707 and conserved domain: COG2358

>COG2358 Imp TRAP-type uncharacterized transport system, periplasmic component [General function prediction only].
Probab=96.57  E-value=0.011  Score=33.72  Aligned_cols=124  Identities=17%  Similarity=0.227  Sum_probs=73.4

Q ss_pred             CCCEEEE-EECC--HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHC
Q ss_conf             3767999-8034--258999999999998779807999815762057898852101335301213320247678767624
Q gi|254780707|r   24 ARNRIRI-AGSS--TLFPYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKKH  100 (346)
Q Consensus        24 a~~~I~i-~GSs--t~~P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~~  100 (346)
T Consensus        24 ~~~~itigTG~~~G~YY~ig~~ia~~~~~~~~~i~~~v~~tggSv~Nl~~i~~Ge----~d~alvq~d~---a~~ay~G~   96 (321)
T COG2358          24 EPKFITIGTGSTGGVYYPIGGGLAQLLNKDEKGIECSVVPTGGSVENLKLLASGE----ADLALVQSDV---AYEAYNGT   96 (321)
T ss_pred             CCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCC----CCHHHHHHHH---HHHHHHCC
T ss_conf             7637999606998622303789999985147781899960654299998675376----2535666789---99987185


Q ss_pred             CCC-------CCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCC
Q ss_conf             878-------7246665215412554166654568888888764102555553236730232310011122450354488
Q gi|254780707|r  101 GVS-------DIQEVTIGHDGILLVSDRDMVSVSLTVEDLYKALASYLIVDDKVVFNPLKKWSEIRPDFPEVRIAIYVPS  173 (346)
Q Consensus       101 ~~~-------~~~~~~v~~d~i~i~~n~~~~~~~lt~~~l~~~~~~~~~~~~~i~~g~i~~W~~~~~~lp~~~I~~~~r~  173 (346)
T Consensus        97 g~f~~~~~~~~lr~v~~ly---------pe~~~vv~r~d-----------------~~Ikti~DL~GK------rV~iG~  144 (321)
T COG2358          97 GSFEGKGKDENLRAVAALY---------PEPFHVVTRKD-----------------AGIKTIADLKGK------RVAIGP  144 (321)
T ss_pred             CCCCCCCCCCCHHHHEECC---------CCEEEEEEECC-----------------CCCCEEHHCCCC------EEEECC
T ss_conf             3114566551433221305---------42089999668-----------------896560103898------886269


Q ss_pred             CCCCHHHHHHHHH
Q ss_conf             5423578999885
Q gi|254780707|r  174 GKHGTREVLEKKV  186 (346)
Q Consensus       174 ~~SGT~~~F~~~v  186 (346)
T Consensus       145 ~gSgt~~~a~~il  157 (321)
T COG2358         145 PGSGTEATARQIL  157 (321)
T ss_pred             CCCCCHHHHHHHH
T ss_conf             9974088999999