HHsearch alignment for GI: 254780707 and conserved domain: PRK09791

>PRK09791 putative DNA-binding transcriptional regulator; Provisional.
Probab=96.04  E-value=0.092  Score=28.57  Aligned_cols=92  Identities=10%  Similarity=0.130  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEEECCHHH-HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHH
Q ss_conf             20137679998034258-99999999999877980799981576205789885210133530121332024767876762
Q gi|254780707|r   21 GTFARNRIRIAGSSTLF-PYSKIIAENFSEYFPEFKTPFVESGGSSVGLKEFCRGIGDDTIDIVNSSRKITQNELDECKK   99 (346)
Q Consensus        21 ~~~a~~~I~i~GSst~~-P~~~~~a~~y~~~~~~~~~~~~~~~GSg~Gi~~~~~G~~~~~~dig~ssr~l~~~E~~~~~~   99 (346)
T Consensus        90 ~~~~~G~l~Ig~~~~~~~~~lp~~l~~f~~~~P~v~i~-i~~~~~~~~~~~l~~g~----~D~~i~~~~~~~~~------  158 (302)
T PRK09791         90 QGQLAGQINIGMGASISRSLMPAVISRFHQQHPQVKVR-IMEGQLVSMINELRQGE----LDFTINTYYQGPYD------  158 (302)
T ss_pred             HCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCHHHHHHHHHCCC----CCEEEECCCCCCCC------
T ss_conf             06766339998626889871199999999988797799-99899999999998799----77899656788788------


Q ss_pred             CCCCCCEEEEEECCCCEEEECCCCCCC
Q ss_conf             487872466652154125541666545
Q gi|254780707|r  100 HGVSDIQEVTIGHDGILLVSDRDMVSV  126 (346)
Q Consensus       100 ~~~~~~~~~~v~~d~i~i~~n~~~~~~  126 (346)
T Consensus       159 ---~~l~~~~l~~~~~~~v~~~~hpl~  182 (302)
T PRK09791        159 ---HEFTFEKLLEKQFAIFCRPGHPAI  182 (302)
T ss_pred             ---CCEEEEEEEEEEEEEEECCCCCCC
T ss_conf             ---764799977401599983898435